Metrikler
Yayın
139
Açık Erişim
26
BM Sürdürülebilir Kalkınma Amaçları
Duyurular & Dokümanlar
Tez Dosyaları
Dosya İndir
Eğitim Bilgileri
2009 - 2014
2009 - 2014Doktora
Dokuz Eylül Üniversitesi, Sağlık Bilimleri Enstitüsü, Biyomühendislik (Dr), Türkiye
2005 - 2009
2005 - 2009Yüksek Lisans
Dokuz Eylül Üniversitesi, Sağlık Bilimleri Enstitüsü, Tıbbi Bilişim (Yl) (Tezli), Türkiye
2001 - 2005
2001 - 2005Lisans
Ege Üniversitesi, Fen Fakültesi, Biyoloji Bölümü, Türkiye
Yaptığı Tezler
2014
2014Doktora
A literature-driven clinical decision support system for human congenital malformations
Dokuz Eylül Üniversitesi, Sağlık Bilimleri Enstitüsü, Biyomühendislik (Dr)
2009
2009Yüksek Lisans
Hepatosellüler karsinoma mikrodizin ekspresyon verilerinin in silico modellenmesi
Dokuz Eylül Üniversitesi, Sağlık Bilimleri Enstitüsü, Tıbbi Bilişim (Yl) (Tezli)
Yabancı Diller
C1 İleri
C1 İleriİngilizce
Araştırma Alanları
Biyoinformatik
Genomiks
Akademik Ünvanlar / Görevler
2016 - Devam Ediyor
2016 - Devam EdiyorYrd. Doç. Dr.
Dokuz Eylül Üniversitesi, İzmir Uluslararası Biyotıp ve Genom Enstitüsü, Genom Bilimleri Ve Moleküler Biyoteknoloji Anabilim Dalı
2005 - 2014
2005 - 2014Araştırma Görevlisi
Dokuz Eylül Üniversitesi, Sağlık Bilimleri Enstitüsü
Yönetimsel Görevler
2019 - 2022
2019 - 2022Anabilim/Bilim Dalı Başkanı
Dokuz Eylül Üniversitesi, İzmir Uluslararası Biyotıp ve Genom Enstitüsü
Yönetilen Tezler
2024
2024Doktora
Anti-kanser tek domainli antikor takımlarının geliştirilmesi
KARAKÜLAH G. (Danışman)
N.EDA(Öğrenci)
2023
2023Yüksek Lisans
Bağırsak mikrobiyotası fonksiyonel bolluğu referans aralıklarının dinamik kestrimi için bir uygulama programlama arayüzü geliştirilmesi
KARAKÜLAH G. (Eş Danışman), OKTAY Y. (Eş Danışman)
L.BİNOKAY(Öğrenci)
2023
2023Yüksek Lisans
Nedilasyon yolağının hepatokarsinogenez sürecindeki rolünün araştırılması
KARAKÜLAH G. (Eş Danışman), ATABEY S. N. (Eş Danışman)
I.KILIÇGÜN(Öğrenci)
2023
2023Yüksek Lisans
Development of an application programming interface for dynamically estimating reference intervals for functional abundances of gut microbiota
KARAKÜLAH G. (Eş Danışman), OKTAY Y. (Eş Danışman)
L.BİNOKAY(Öğrenci)
2021
2021Yüksek Lisans
Recombinant production and characterization of matrix metalloproteinases- 1 and -13 for treatment of macular corneal dystrophy
KARAKÜLAH G. (Danışman), KALYONCU UZUNLAR S. (Eş Danışman)
S.GÜL(Öğrenci)
2021
2021Yüksek Lisans
Understanding the molecular mechanisms involved in bladder tumorigenesis using experimental and computational approaches
KARAKÜLAH G. (Eş Danışman), KARAKÜLAH G.(Eş Danışman), ERKEK ÖZHAN S. (Eş Danışman)
A.ERAY(Öğrenci)
2020
2020Yüksek Lisans
Comprehensive transcriptome analysis of dizygotic twins and their parents with autism spectrum disorders
KARAKÜLAH G. (Eş Danışman), OKTAY Y. (Eş Danışman)
K.OKAY(Öğrenci)
2020
2020Yüksek Lisans
Elf3 regulated transcriptome dynamics during mesenchymal to epithelial transition
KARAKÜLAH G. (Eş Danışman), ALOTAİBİ H. (Eş Danışman)
H.UZUNER(Öğrenci)
2019
2019Yüksek Lisans
Identification and annotation of putative long noncoding RNAs involved in mesenchymal-epithelial transition
ALOTAİBİ H. (Eş Danışman), KARAKÜLAH G. (Eş Danışman)
D.ESKİER(Öğrenci)
Makaleler
Tümü (86)
SCI-E, SSCI, AHCI (78)
SCI-E, SSCI, AHCI, ESCI (86)
ESCI (4)
Scopus (82)
TRDizin (9)
2025
20251. Characterization of tRNA-derived fragments in the small neuron-derived extracellular vesicles of Alzheimer's disease patients
Arioz B. I., Binokay L., Tastan B., Genc B., Cotuk A., DURSUN E., et al.
Brain Research
, cilt.1862, 2025 (SCI-Expanded, Scopus)
2025
20252. Escape from TGF-β-induced senescence promotes aggressive hallmarks in epithelial hepatocellular carcinoma cells
Kalyoncu M., Demirci D., Eris S., Dayanc B., Cakiroglu E., Basol M., et al.
MOLECULAR ONCOLOGY
, cilt.19, sa.9, ss.2594-2618, 2025 (SCI-Expanded, Scopus)
2025
20253. Caveolin-1 contributes to sorafenib resistance by enhancing aggressive phenotype in hepatocellular carcinoma
Bagirsakci E., Korhan P., Islakoglu Y. O., Solmaz G., Keles B., Binokay L., et al.
FEBS OPEN BIO
, cilt.15, ss.222, 2025 (SCI-Expanded, Scopus)
2025
20254. Genome-wide discovery and characterization of intronic RNAs in human
Gurer D. C., Vatansever I. E., Ceren S. E., KARAKÜLAH G., Gautheret D., Akgul B.
FEBS OPEN BIO
, cilt.15, ss.177, 2025 (SCI-Expanded, Scopus)
2025
20255. The Role of tRNA Fragments on Neurogenesis Alteration by H₂O₂-induced Oxidative Stress
Karacicek B., Katkat E., Binokay L., Ozhan G., KARAKÜLAH G., GENÇ Ş.
Journal of Molecular Neuroscience
, cilt.75, sa.2, 2025 (SCI-Expanded, Scopus)
2025
20256. Integrative multi-omics identifies AP-1 transcription factor as a targetable mediator of acquired osimertinib resistance in non-small cell lung cancer
Dayanc B., Eris S., Gulfirat N. E., Ozden-Yilmaz G., Cakiroglu E., Coskun Deniz O. S., et al.
CELL DEATH & DISEASE
, cilt.16, sa.1, 2025 (SCI-Expanded, Scopus)
2025
20257. Genome-wide CRISPR screen identifies BUB1 kinase as a druggable vulnerability in malignant pleural mesothelioma
Cakiroglu E., Eris S., Oz O., Karakülah G., Senturk Ş.
CELL DEATH & DISEASE
, cilt.16, sa.1, 2025 (SCI-Expanded, Scopus)
2025
20258. PGSXplorer: an integrated nextflow pipeline for comprehensive quality control and polygenic score model development
Yaraş T., OKTAY Y., KARAKÜLAH G.
PeerJ
, cilt.13, sa.2, 2025 (SCI-Expanded, Scopus)
2025
20259. Fusion transcripts landscape in hepatocellular carcinoma and potential impact on the expression of fusion partners
Öztemur Islakoğlu Y., Korhan P., Binokay L., Keleş B., Bağırsakçı E., Uludağ Taşçıoğlu M., et al.
RNA Biology
, cilt.22, sa.1, ss.1-16, 2025 (SCI-Expanded, Scopus)
2025
202510. Exploring Regulatory Roles of Transposable Elements in EMT and MET through Data-Driven Analysis: Insights from regulaTER
Eskier D., Yetkin S., Arslan N., Karakülah G., Alotaibi H.
JOURNAL OF MOLECULAR BIOLOGY
, cilt.437, sa.2, 2025 (SCI-Expanded, Scopus)
2024
202411. Nucleocytoplasmic β-catenin expression contributes to neuroendocrine differentiation in muscle invasive bladder cancer
Akman B., Bursalı A., GÜRSES M., SUNER KARAKÜLAH A., KARAKÜLAH G., Mungan U., et al.
CANCER SCIENCE
, cilt.115, sa.9, ss.2985-2997, 2024 (SCI-Expanded, Scopus)
2024
202412. Investigating sialyltransferases in insects: computational identification of conserved motifs and comparison to vertebrate enzymes
Ersoy C., Izzetoğlu S., KARAKÜLAH G., Turgay-Izzetoğlu G.
Biharean Biologist
, cilt.18, sa.1, ss.68-78, 2024 (Scopus)
2024
202413. Hepatic fibrogenesis in TP53KO organoids within a pro-carcinogenic microenvironment
Karabicici M., Akbari S., ÇALIŞKAN C., KARAKÜLAH G., ŞENTÜRK Ş., ÖZ Ö., et al.
FEBS OPEN BIO
, cilt.14, ss.306, 2024 (SCI-Expanded)
2024
202414. Development of methods and tools in NPCs and zebrafish towards modeling of DNA sequence variants in patients with pachygyria
Kuruoglu A., HIZ A. S., Cark O., Gencpinar P., BORA U., KARAKÜLAH G., et al.
FEBS OPEN BIO
, cilt.14, ss.491, 2024 (SCI-Expanded)
2024
202415. Generation of Anterior Segment of the Eye Cells from hiPSCs in Microfluidic Platforms
Koçak G., Uyulgan S., Polatlı E., Sarı V., Kahveci B., Bursali A., et al.
Advanced Biology
, cilt.8, sa.5, 2024 (SCI-Expanded, Scopus)
2024
202416. Benchmarking the accuracy of structure-based binding affinity predictors on Spike–ACE2 deep mutational interaction set
Ozden B., Şamiloğlu E., Özsan A., Erguven M., Yükrük C., Koşaca M., et al.
Proteins: Structure, Function and Bioinformatics
, cilt.92, sa.4, ss.529-539, 2024 (SCI-Expanded, Scopus)
2024
202417. Retinoids and EZH2 inhibitors cooperate to orchestrate anti-oncogenic effects on bladder cancer cells
Ozgun G., Yaras T., Akman B., Özden-Yılmaz G., Landman N., Karakülah G., et al.
CANCER GENE THERAPY
, cilt.31, sa.4, ss.537-551, 2024 (SCI-Expanded, Scopus)
2024
202418. Expressions of the satellite repeat HSAT5 and transposable elements are implicated in disease progression and survival in glioma
Köse S. N., Yaraş T., Bursali A., OKTAY Y., Yandim C., KARAKÜLAH G.
Turkish Journal of Biology
, cilt.48, sa.4, ss.242-256, 2024 (SCI-Expanded, Scopus, TRDizin)
2024
202419. An API for dynamic estimation of reference intervals for functional abundances of gut microbiota
Binokay L., Oktay Y., Karakülah G.
BIOLOGIA
, cilt.79, sa.1, ss.343-353, 2024 (SCI-Expanded, Scopus)
2023
202320. Osimertinib resistance mechanisms in nonsmall cell lung cancer using focused CRISPR Screen: FOSL1 and JUN
Uluata-Dayanc B., ERİŞ S., Cakiroglu E., Ozden-Yilmaz G., Coskun-Deniz O. S., KARAKÜLAH G., et al.
FEBS OPEN BIO
, cilt.13, ss.149-150, 2023 (SCI-Expanded)
2023
202321. ?In the light of evolution:? keratins as exceptional tumor biomarkers
Takan I., Karakulah G., Louka A., Pavlopoulou A.
PEERJ
, cilt.11, 2023 (SCI-Expanded, Scopus)
2023
202322. Differential Occupancy and Regulatory Interactions of KDM6A in Bladder Cell Lines
Özden-Yılmaz G., Savas B., Bursalı A., Eray A., Arıbaş A., ŞENTÜRK Ş., et al.
CELLS
, cilt.12, sa.6, 2023 (SCI-Expanded, Scopus)
2023
202323. Whole Genome Analysis of Dizygotic Twins With Autism Reveals Prevalent Transposon Insertion Within Neuronal Regulatory Elements: Potential Implications for Disease Etiology and Clinical Assessment
Okay K., ÜNAL VARIŞ P., MİRAL S., PAVLOPOULOU A., OKTAY Y., KARAKÜLAH G.
JOURNAL OF AUTISM AND DEVELOPMENTAL DISORDERS
, cilt.53, sa.3, ss.1091-1106, 2023 (SSCI, Scopus)
2023
202324. FLI1 and FRA1 transcription factors drive the transcriptional regulatory networks characterizing muscle invasive bladder cancer
Guneri-Sozeri P. Y., Özden-Yılmaz G., Kisim A., Cakiroglu E., Eray A., Uzuner H., et al.
COMMUNICATIONS BIOLOGY
, cilt.6, sa.1, 2023 (SCI-Expanded, Scopus)
2023
202325. StemnesScoRe: an R package to estimate the stemness of glioma cancer cells at single-cell resolution
Kochan N., OKTAY Y., Karakulah G.
TURKISH JOURNAL OF BIOLOGY
, cilt.47, sa.6, 2023 (SCI-Expanded, Scopus, TRDizin)
2023
202326. An in silico approach to the identification of diagnostic and prognostic markers in low-grade gliomas
Özbek M., Toy H. I., Oktay Y., Karakülah G., SUNER KARAKÜLAH A., Pavlopoulou A.
PeerJ
, cilt.11, 2023 (SCI-Expanded, Scopus)
2023
202327. PlanTEnrichment: A How-to Guide on Rapid Identification of Transposable Elements Associated with Regions of Interest in Select Plant Genomes
Eskier D., Arıbaş A., KARAKÜLAH G.
Methods in molecular biology (Clifton, N.J.)
, cilt.2703, ss.59-70, 2023 (Scopus)
2023
202328. TRAIL promotes the polarization of human macrophages toward a proinflammatory M1 phenotype and is associated with increased survival in cancer patients with high tumor macrophage content
Gunalp S., Helvaci D. G., Oner A., Bursalı A., Conforte A., GÜNER H., et al.
FRONTIERS IN IMMUNOLOGY
, cilt.14, 2023 (SCI-Expanded, Scopus)
2023
202329. A Counterintuitive Neutrophil-Mediated Pattern in COVID-19 Patients Revealed through Transcriptomics Analysis
Özbek M., Toy H. I., Takan I., Asfa S., Arshinchi Bonab R., Karakülah G., et al.
VIRUSES-BASEL
, cilt.15, sa.1, 2023 (SCI-Expanded, Scopus)
2022
202230. Shared Biological Pathways and Processes in Patients with Intellectual Disability: A Multicenter Study
Günay Ç., Aykol D., Özsoy Ö., Sönmezler E., Hancı Y. S., Kara B., et al.
Neuropediatrics
, cilt.54, sa.4, ss.225-238, 2022 (SCI-Expanded, Scopus)
2022
202231. Identification of neoplasm-specific signatures of miRNA interactions by employing a systems biology approach
Bonab R. A., Asfa S., Kontou P., KARAKÜLAH G., PAVLOPOULOU A.
PEERJ
, cilt.10, 2022 (SCI-Expanded, Scopus)
2022
202232. Investigating Partners in Crime: Osimertinib Resistance Mechanisms in Non-small Cell Lung Cancer Using Focused CRISPR Screen
Dayanc B. U., Eris S., Cakiroglu E., Mazi F. A., COŞKUN BADUR S., Demirci D., et al.
JOURNAL OF THORACIC ONCOLOGY
, cilt.17, sa.9, 2022 (SCI-Expanded, Scopus)
2022
202233. Genome-wide CRISPR screen identifies BUB1 as a cancer-dependency gene in malignant pleural mesothelioma
Cakiroglu E., ŞENTÜRK Ş., KARAKÜLAH G.
FEBS OPEN BIO
, ss.18, 2022 (SCI-Expanded, Scopus)
2022
202234. Alteration of miRNAs in Small Neuron-Derived Extracellular Vesicles of Alzheimer's Disease Patients and the Effect of Extracellular Vesicles on Microglial Immune Responses
Durur D. Y., Tastan B., Tufekci K. U., Olcum M., Uzuner H., Karakulah G., et al.
JOURNAL OF MOLECULAR NEUROSCIENCE
, cilt.72, sa.6, ss.1182-1194, 2022 (SCI-Expanded, Scopus)
2022
202235. Repeat expression is linked to patient survival and exhibits single nucleotide variation in pancreatic cancer revealing LTR70:r.879A>G
Yandim C., KARAKÜLAH G.
GENE
, cilt.822, 2022 (SCI-Expanded, Scopus)
2022
202236. TAp73 alpha is Upregulated in the Most Common Human Cancers
Iscan E., Karakülah G., Ekin U., Ozturk M., Uzuner H., SUNER KARAKÜLAH A.
MOLECULAR BIOLOGY
, cilt.56, sa.2, ss.251-256, 2022 (SCI-Expanded, Scopus)
2022
202237. TAp73 alpha is Upregulated in the Most Common Human Cancers
Iscan E., Karakulah G., Ekin U., Ozturk M., Uzuner H., SUNER KARAKÜLAH A.
MOLECULAR BIOLOGY
, cilt.56, sa.2, ss.251-256, 2022 (SCI-Expanded, Scopus)
2022
202238. VARS1 mutations associated with neurodevelopmental disorder are located on a short amino acid stretch of the anticodon-binding domain
Hız A. S., Kılıç S., Bademci G., Karakulak T., Erdogan A., Ozden B., et al.
Turkish Journal of Biology
, cilt.46, sa.6, ss.458-464, 2022 (SCI-Expanded, Scopus, TRDizin)
2021
202139. Transcriptome Dynamics of Human Neuronal Differentiation From iPSC
Kurus M., Akbari S., Eskier D., Bursali A., Ergin K., Erdal E., et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
, cilt.9, 2021 (SCI-Expanded, Scopus)
2021
202140. Evaluation of ATAD2 as a Potential Target in Hepatocellular Carcinoma
Ekin U., Yuzugullu H., Ozen C., Korhan P., Bagirsakci E., Yilmaz F., et al.
JOURNAL OF GASTROINTESTINAL CANCER
, cilt.52, sa.4, ss.1356-1369, 2021 (ESCI, Scopus)
2021
202141. In Silico Methods for the Identification of Diagnostic and Favorable Prognostic Markers in Acute Myeloid Leukemia.
Yilmaz H., Toy H. I., Marquardt S., KARAKÜLAH G., KÜÇÜK C., Kontou P., et al.
International journal of molecular sciences
, cilt.22, sa.17, 2021 (SCI-Expanded, Scopus)
2021
202142. Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach.
Theofylaktou D., Takan I., Karakulah G., Biz G. M., Zanni V., Pavlopoulou A., et al.
Oxidative medicine and cellular longevity
, cilt.2021, ss.9993518, 2021 (SCI-Expanded, Scopus)
2021
202143. Modulation of macrophage polarization by TNF-related apoptosis-inducing ligand
Gunalp S., Helvaci D. G., KARAKÜLAH G., Sag D.
EUROPEAN JOURNAL OF IMMUNOLOGY
, cilt.51, ss.214, 2021 (SCI-Expanded, Scopus)
2021
202144. Different selection dynamics of S and RdRp between SARS-CoV-2 genomes with and without the dominant mutations
Kochan N., Eskier D., SUNER KARAKÜLAH A., Karakulah G., OKTAY Y.
INFECTION GENETICS AND EVOLUTION
, cilt.91, 2021 (SCI-Expanded, Scopus)
2021
202145. Alternative splicing and gene co-expression network-based analysis of dizygotic twins with autism-spectrum disorder and their parents
Okay K., Varis P. U., Miral S., Ekinci B., Yaras T., KARAKÜLAH G., et al.
GENOMICS
, cilt.113, sa.4, ss.2561-2571, 2021 (SCI-Expanded, Scopus)
2021
202146. Association of NRG3 and ERBB4 gene polymorphism with nicotine dependence in Turkish population
Kara H. G., Erdal M. E., Yilmaz S. G., Sengul C., Sengul C. B., KARAKÜLAH G.
MOLECULAR BIOLOGY REPORTS
, cilt.48, sa.6, ss.5319-5326, 2021 (SCI-Expanded, Scopus)
2021
202147. Investigating Molecular Determinants of Cancer Cell Resistance to Ionizing Radiation Through an Integrative Bioinformatics Approach.
Toy H. I., Karakulah G., Kontou P. I., Alotaibi H., Georgakilas A. G., Pavlopoulou A.
Frontiers in cell and developmental biology
, cilt.9, ss.620248, 2021 (SCI-Expanded, Scopus)
2021
202148. Determining care burden and psychiatric symptom level in caregiver of schizophrenia patient
Koc M., TEL H., KARAKÜLAH G.
PERSPECTIVES IN PSYCHIATRIC CARE
, cilt.57, sa.2, ss.642-647, 2021 (SCI-Expanded, SSCI, Scopus)
2021
202149. Identification of Essential Genes in Malignant Pleural Mesothelioma Using Genome-Wide CRISPR/Cas9-Based Negative Selection Screen
Cakiroglu E., Coskun O., Karakulah G., Senturk Ş.
JOURNAL OF THORACIC ONCOLOGY
, sa.3, 2021 (SCI-Expanded, Scopus)
2021
202150. Current mutatome of SARS-CoV-2 in Turkey reveals mutations of interest.
Eskier D., Akalp E., Dalan Ö., KARAKÜLAH G., OKTAY Y.
Turkish journal of biology = Turk biyoloji dergisi
, cilt.45, sa.1, ss.104-113, 2021 (SCI-Expanded, Scopus, TRDizin)
2021
202151. TAp73β Can Promote Hepatocellular Carcinoma Dedifferentiation
Iscan E., Ekin U., Yildiz G., Oz O., Keles U., Suner Karakülah A., et al.
CANCERS
, cilt.13, sa.4, 2021 (SCI-Expanded, Scopus)
2021
202152. In Silico Identification of Stress-Associated Transposable Elements in Arabidopsis thaliana Using Public Transcriptome Data
Eskier D., KARAKÜLAH G.
PLANT TRANSPOSABLE ELEMENTS
, cilt.2250, ss.15-30, 2021 (SCI-Expanded, Scopus)
2021
202153. Identification of differentially expressed genomic repeats in primary hepatocellular carcinoma and their potential links to biological processes and survival
Karakulah G., Yandim C.
TURKISH JOURNAL OF BIOLOGY
, cilt.45, sa.5, ss.599-612, 2021 (SCI-Expanded, Scopus, TRDizin)
2020
202054. Differential expression of full-length and NH2 terminally truncated FAM134B isoforms in normal physiology and cancer.
Keles U., Iscan E., Yilmaz H. E., Karakulah G., SUNER KARAKÜLAH A., Bal E., et al.
American journal of physiology. Gastrointestinal and liver physiology
, cilt.319, sa.6, 2020 (SCI-Expanded, Scopus)
2020
202055. Mutations of SARS-CoV-2 nsp14 exhibit strong association with increased genome-wide mutation load
Eskier D., SUNER KARAKÜLAH A., OKTAY Y., KARAKÜLAH G.
PEERJ
, cilt.8, 2020 (SCI-Expanded, Scopus)
2020
202056. Analysis of open chromatin regions in bladder cancer links β-catenin mutations and Wnt signaling with neuronal subtype of bladder cancer
Eray A., Gueneri P. Y., Yilmaz G. O., Karakuelah G., Erkek-Ozhan S.
SCIENTIFIC REPORTS
, cilt.10, sa.1, 2020 (SCI-Expanded, Scopus)
2020
202057. Mutation density changes in SARS-CoV-2 are related to the pandemic stage but to a lesser extent in the dominant strain with mutations in spike and RdRp
Eskier D., SUNER KARAKÜLAH A., KARAKÜLAH G., OKTAY Y.
PEERJ
, cilt.8, 2020 (SCI-Expanded, Scopus)
2020
202058. RdRp mutations are associated with SARS-CoV-2 genome evolution
Eskier D., KARAKÜLAH G., SUNER KARAKÜLAH A., OKTAY Y.
PEERJ
, cilt.8, 2020 (SCI-Expanded, Scopus)
2020
202059. Signature changes in the expressions of protein-coding genes, lncRNAs, and repeat elements in early and late cellular senescence
KARAKÜLAH G., Yandim C.
TURKISH JOURNAL OF BIOLOGY
, cilt.44, sa.6, ss.356-370, 2020 (SCI-Expanded, Scopus, TRDizin)
2019
201960. TEffectR: an R package for studying the potential effects of transposable elements on gene expression with linear regression model
Karakulah G., Arslan N., Yandim C., SUNER KARAKÜLAH A.
PEERJ
, cilt.7, 2019 (SCI-Expanded, Scopus)
2019
201961. Dysregulated expression of repetitive DNA in ER+/HER2-breast cancer
Yandim C., KARAKÜLAH G.
CANCER GENETICS
, cilt.239, ss.36-45, 2019 (SCI-Expanded, Scopus)
2019
201962. Efficacy and Safety of Paliperidone Palmitate Treatment in Patients With Schizophrenia A Real-World Multicenter, Retrospective, Mirror-Image Study
Devrimci-Ozguven H., Atmaca M., Baran Z., Cengisiz C., Cinar C., Erol A., et al.
JOURNAL OF CLINICAL PSYCHOPHARMACOLOGY
, cilt.39, sa.6, ss.604-610, 2019 (SCI-Expanded, SSCI, Scopus)
2019
201963. Expression dynamics of repetitive DNA in early human embryonic development
Yandim C., KARAKÜLAH G.
BMC GENOMICS
, cilt.20, 2019 (SCI-Expanded, Scopus)
2019
201964. C-Reactive Protein and Platelet-Lymphocyte Ratio as Potential Tumor Markers in Low-Alpha-Fetoprotein Hepatocellular Carcinoma
SUNER KARAKÜLAH A., Carr B. I., AKKIZ H., KARAKÜLAH G., ÜSKÜDAR O., YALÇIN K., et al.
ONCOLOGY
, cilt.96, sa.1, ss.25-32, 2019 (SCI-Expanded, Scopus)
2018
201865. RTFAdb: A database of computationally predicted associations between retrotransposons and transcription factors in the human and mouse genomes
KARAKÜLAH G.
GENOMICS
, cilt.110, sa.5, ss.257-262, 2018 (SCI-Expanded, Scopus)
2018
201866. In silico Phylogenetic Analysis of hAT Transposable Elements in Plants.
KARAKÜLAH G., Pavlopoulou A.
Genes
, cilt.9, sa.6, 2018 (SCI-Expanded, Scopus)
2017
201767. Discovery and Annotation of Plant Endogenous Target Mimicry Sequences from Public Transcriptome Libraries: A Case Study of Prunus persica
KARAKÜLAH G.
JOURNAL OF INTEGRATIVE BIOINFORMATICS
, cilt.14, sa.4, 2017 (ESCI, Scopus)
2017
201768. PlanTEnrichment: A tool for enrichment analysis of transposable elements in plants
KARAKÜLAH G., SUNER KARAKÜLAH A.
GENOMICS
, cilt.109, ss.336-340, 2017 (SCI-Expanded, Scopus)
2017
201769. Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL
Zelinger L., KARAKÜLAH G., Chaitankar V., Kim J., Yang H., Brooks M. J., et al.
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE
, cilt.58, sa.11, ss.4422-4435, 2017 (SCI-Expanded, Scopus)
2017
201770. Relationship between Serum Bilirubin Levels and Metabolic Syndrome in Patients with Schizophrenia Spectrum Disorders
KARADAĞ R. F., Sengul C. B., Enli Y., KARAKÜLAH G., Alacam H., Kaptanoglu B., et al.
CLINICAL PSYCHOPHARMACOLOGY AND NEUROSCIENCE
, cilt.15, sa.2, ss.153-162, 2017 (SCI-Expanded, Scopus)
2017
201771. MicroRNA exocytosis by large dense-core vesicle fusion
Gumurdu A., Yildiz R., Eren E., KARAKÜLAH G., Unver T., GENÇ Ş., et al.
SCIENTIFIC REPORTS
, cilt.7, 2017 (SCI-Expanded, Scopus)
2016
201672. PeTMbase: A Database of Plant Endogenous Target Mimics (eTMs)
KARAKÜLAH G., Kurtoglu K. Y., Unver T.
PLOS ONE
, cilt.11, sa.12, 2016 (SCI-Expanded, Scopus)
2016
201673. Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research
Chaitankar V., KARAKÜLAH G., Ratnapriya R., Giuste F. O., Brooks M. J., Swaroop A.
PROGRESS IN RETINAL AND EYE RESEARCH
, cilt.55, ss.1-31, 2016 (SCI-Expanded, Scopus)
2016
201674. NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors
Kim J., Yang H., Brooks M. J., Zelinger L., KARAKÜLAH G., Gotoh N., et al.
CELL REPORTS
, cilt.17, sa.9, ss.2460-2473, 2016 (SCI-Expanded, Scopus)
2016
201675. sandflyDST: a dynamic web-based decision support tool for the morphological identification of sandflies present in Anatolia and mainland Europe, and user study
KARAKÜLAH G., Karakus M., SUNER KARAKÜLAH A., Demir S., Arserim S. K., Toz S., et al.
MEDICAL AND VETERINARY ENTOMOLOGY
, cilt.30, sa.3, ss.321-329, 2016 (SCI-Expanded, Scopus)
2016
201676. Investigation of medical board reports of disability due to mental health problems
Yildiz M., Ozsoy F., Batmaz S., Songur E., KARAKÜLAH G.
CUKUROVA MEDICAL JOURNAL
, cilt.41, sa.2, ss.253-258, 2016 (ESCI, TRDizin)
2016
201677. Effect of adult attention deficit hyperactivity symptoms on smoking cessation
Balci Sengul C., Sengul C., Unlu G., Buber A., KARAKÜLAH G., Herken H.
ANADOLU PSIKIYATRI DERGISI-ANATOLIAN JOURNAL OF PSYCHIATRY
, cilt.17, sa.2, ss.104-110, 2016 (SCI-Expanded, Scopus, TRDizin)
2016
201678. Differential Expression of Hyperhydricity Responsive Peach MicroRNAs
Diler E., Unver T., KARAKÜLAH G.
JOURNAL OF INTEGRATIVE BIOINFORMATICS
, cilt.13, sa.5, 2016 (ESCI, Scopus)
2015
201579. StatXFinder: a web-based self-directed tool that provides appropriate statistical test selection for biomedical researchers in their scientific studies
SUNER KARAKÜLAH A., KARAKÜLAH G., KOŞANER Ö., DİCLE O.
SPRINGERPLUS
, cilt.4, 2015 (SCI-Expanded, Scopus)
2015
201580. corRECTreatment: A web-based decision support tool for rectal cancer treatment that uses the analytic hierarchy process and decision tree
SUNER KARAKÜLAH A., Karakuelah G., Dicle O., Soekmen S., Celikoglu C. C.
APPLIED CLINICAL INFORMATICS
, cilt.6, sa.1, ss.56-74, 2015 (SCI-Expanded, Scopus)
2014
201481. Risk of Psychotropic Drug Interactions in Real World Settings: a Pilot Study in Patients with Schizophrenia and Schizoaffective Disorder
Sengul M. C. B., KARADAĞ R. F., Sengul C., KARAKÜLAH G., Kalkanci O., Herken H.
KLINIK PSIKOFARMAKOLOJI BULTENI-BULLETIN OF CLINICAL PSYCHOPHARMACOLOGY
, cilt.24, sa.3, ss.235-247, 2014 (SCI-Expanded, Scopus, TRDizin)
2014
201482. Computer Based Extraction of Phenoptypic Features of Human Congenital Anomalies from the Digital Literature with Natural Language Processing Techniques
KARAKÜLAH G., DİCLE O., SÜMER A., KOŞANER Ö., BİRANT Ç. C., BERBER T., et al.
Studies in Health Technology and Informatics
, cilt.205, ss.570-574, 2014 (Scopus)
2014
201483. Towards a Web-Based Decision Support Tool for Selecting Appropriate Statistical Test in Medical and Biological Sciences
SÜMER A., KARAKÜLAH G., DİCLE O.
Studies in Health Technology and Informatics
, cilt.205, ss.48-52, 2014 (Scopus)
2012
201284. Early Biventricular Molecular Responses to an Acute Myocardial Infarction
Erdal C., KARAKÜLAH G., Fermanci E., Kunter I., Silistreli E. E., Canda T., et al.
INTERNATIONAL JOURNAL OF MEDICAL SCIENCES
, cilt.9, sa.1, ss.74-82, 2012 (SCI-Expanded, Scopus)
2011
201185. Genome-Wide Gene Expression Analysis of NIH 3T3 Cell Line Under Mechanical Stimulation
Demirci E. K., Demirci T., Trzewik J., Linder P., KARAKÜLAH G., Artmann G. M., et al.
CELLULAR AND MOLECULAR BIOENGINEERING
, cilt.4, sa.1, ss.46-55, 2011 (SCI-Expanded, Scopus)
2011
201186. mESAdb: microRNA Expression and Sequence Analysis Database
Kaya K. D., KARAKÜLAH G., Yakicier C. M., ACAR A. C., KONU KARAKAYALI Ö.
NUCLEIC ACIDS RESEARCH
, cilt.39, 2011 (SCI-Expanded, Scopus)
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler
2024
20241. Enhancing genomic data sharing with blockchain-enabled dynamic consent in Beacon v2
Binokay L., Celik H. M., Gurdal G., Ayav T., Tuglular T., OKTAY Y., et al.
57th Conference of the European-Society-of-Human-Genetics (ESHG), Berlin, Almanya, 1 - 04 Haziran 2024, cilt.32, ss.1635-1636, (Özet Bildiri)
2024
20242. Enhancing genomic data sharing with blockchainenabled dynamic consent in Beacon v2
Binokay L., Celik H. M., Gurdal G., Ayav T., Tuglular T., OKTAY Y., et al.
57th Conference of the European-Society-of-Human-Genetics (ESHG), Berlin, Almanya, 1 - 04 Haziran 2024, cilt.32, ss.1635-1636, (Özet Bildiri)
2024
20243. Investigation of the Effects of Mutations in the FYR Module of Kabuki Syndrome-Associated KMT2D Gene on Protein Interactions and Chromatin Organization
Özden Yılmaz G., Yılmazbilek İ., Ölmez Türker A., Ozkan Kucuk N. E., ÖZLÜ SICAKKAN N., KARAKÜLAH G., et al.
9th International Congress of the Molecular Biology Association of Turkey, İzmir, Türkiye, 12 - 14 Eylül 2024, (Özet Bildiri)
2024
20244. Investigating the molecular mechanism of tumor necrosis factor-related apoptosis-inducing ligand-induced macrophage polarization: Transcriptomic analysis of key signaling molecules
Songoren S., Gunalp S., Bursali A., KARAKÜLAH G., SAĞ D.
7th European Conference of Immunology, Dublin, İrlanda, 1 - 04 Eylül 2024, cilt.54, ss.1297, (Özet Bildiri)
2024
20245. Genome-Wide CRISPR Screens: Unveiling BUB1 Kinase as a Druggable Vulnerability in Malignant Pleural Mesothelioma
ÇAKIROĞLU E., ERİŞ S., Öz Ö., KARAKÜLAH G., ŞENTÜRK Ş.
The 2024 Annual Congress of the European Association for Cancer Research (EACR 2024), Rotterdam, Hollanda, 10 - 13 Haziran 2024, cilt.18, ss.183-184, (Özet Bildiri)
2024
20246. Genome-wide CRISPR Screening Identifies RUVBL1/2 Complex as a Druggable Vulnerability in Bladder Cancer
AKDEMİR B., ERİŞ S., Kalyoncu M., ÇAKIROĞLU E., Coşkun Ö. Ş., KARAKÜLAH G., et al.
The 2024 Annual Congress of the European Association for Cancer Research (EACR 2024), Rotterdam, Hollanda, 10 - 13 Haziran 2024, cilt.18, ss.180-181, (Özet Bildiri)
2024
20247. Pooled CRISPR Screening Identifies AP-1 Transcription Factor as a Druggable Driver of Osimertinib Resistance in Non-Small Cell Lung Cancer
ULUATA DAYANÇ B., ERİŞ S., ÇAKIROĞLU E., Özden Yılmaz G., Gülfırat N. E., Coşkun Ö. Ş., et al.
The 2024 Annual Congress of the European Association for Cancer Research (EACR 2024), Rotterdam, Hollanda, 10 - 13 Haziran 2024, cilt.18, ss.224, (Özet Bildiri)
2024
20248. Escape from TGF-β-induced Senescence Promotes Aggressive Cancer Hallmarks in Epithelial Hepatocellular Carcinoma Cells
Kalyoncu M., Demirci D., ERİŞ S., Uluata Dayanç B., ÇAKIROĞLU E., BAŞOL M., et al.
The 2024 Annual Congress of the European Association for Cancer Research (EACR 2024), Rotterdam, Hollanda, 10 - 13 Haziran 2024, cilt.18, ss.347-348, (Özet Bildiri)
2023
20239. A molecular portrait of retinoids and EZH2 inhibitors cooperation to orchestrate cytotoxic effects on bladder cancer cells
Özgün G., Yaraş T., Landman N., KARAKÜLAH G., van Lohuizen M., ŞENTÜRK Ş., et al.
The 47th FEBS Congress, 8 - 12 Temmuz 2023, cilt.13, (Özet Bildiri)
2023
202310. On-chip platform for derivation of ocular cells from hiPSCs
Kocak G., Uyulgan S., Polatli E., Sari V., Kahveci B., Bursali A., et al.
European Chapter of the Tissue-Engineering-and-Regenerative-Medicine-International-Society (TERMIS), Manchester, İngiltere, 28 - 31 Mart 2023, (Özet Bildiri)
2022
202211. Development of methods and tools in NPCs and zebrafish towards modeling of DNA sequence variants in patients with pachygyria by using genome editing technologies
Kuruoglu A., HIZ A. S., Cark O., Gencpinar P., Bora R. U., KARAKÜLAH G., et al.
55th European-Society-of-Human-Genetics (ESHG) Conference, Vienna, Avusturya, 11 - 14 Haziran 2022, cilt.31, ss.477-478, (Özet Bildiri)
2023
202312. Development of a pipeline for the analysis of the regulatory functions of transposable elements in accessible genomic regions
Eskier D., Yetkin S., Arslan N., Erkek S., ALOTAİBİ H., KARAKÜLAH G.
14. Türk Tıp Bilişimi Kongresi, İzmir, Türkiye, 16 - 18 Mart 2023, (Özet Bildiri)
2022
202213. Transcriptomic profiling of induced pluripotent stem cell derived eye field cells
Kahveci B., KOÇAK G., YILDIRIM C. A., Mardinoğlu A., KARAKÜLAH G., GÜVEN S.
15th International Symposium on Health Informatics and Bioinformatics, Mersin, Türkiye, 20 - 21 Ekim 2022, (Özet Bildiri)
2022
202214. Metabolomics analysis of iPSCs derived organoids
Sarı V., KOÇAK G., REÇBER T., KARAKÜLAH G., YILDIRIM C. A., NEMUTLU E., et al.
15th International Symposium on Health Informatics and Bioinformatics, Mersin, Türkiye, 20 - 21 Ekim 2022, (Özet Bildiri)
2022
202215. Investigating Partners in Crime: Osimertinib Resistance Mechanisms in Non-small Cell Lung Cancer Using Focused CRISPR Screen
Dayanç B., Eriş S., Çakıroğlu E., Mazı F. A., Coşkun Ö. Ş., Demirci D., et al.
IASLC 2022 WCLC World Conference on Lung Cancer, Vienna, Avusturya, 6 - 09 Ağustos 2022, cilt.17, ss.407, (Özet Bildiri)
2022
202216. Genome-wide CRISPR screen identifies BUB1 as a cancer-dependency gene in malignant pleural mesothelioma
Cakiroglu E., Şentürk Ş., Karakülah G.
IUBMB-FEBS-PABMB 2022 Congress, Lisbon, Portekiz, 9 - 14 Temmuz 2022, cilt.12, ss.18, (Özet Bildiri)
2022
202217. Functional Analysis of Noncoding RNAs Critical to the Mesenchymal Epithelial Transformation Process
Özkan A., Eskier D., KARAKÜLAH G., ALOTAİBİ H.
8th International Congress of the Molecular Biology Association of Turkey, İstanbul, Türkiye, 9 - 12 Haziran 2022, (Özet Bildiri)
2022
202218. EPIGENETIC REGULATION OF EPITHELIAL TO MESENCHYMAL TRANSITION BY HISTONE VARIANT H3.3A
Özkuru E., Yıldız Ş. N., Kutlu N. K., KARAKÜLAH G., Dimitrov S., ALOTAİBİ H.
8th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon’22), İstanbul, Türkiye, 9 - 12 Haziran 2022, (Özet Bildiri)
2022
202219. THE EFFECT OF HISTONE VARIANT H2A.Z-1 KNOCKDOWN IN EPITHELIAL TO MESENCHYMAL TRANSITION
Yıldız Ş. N., Özkuru E., Kutlu N. K., KARAKÜLAH G., ALOTAİBİ H., Dimitrov S.
8th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon’22), Türkiye, 9 - 12 Haziran 2022, (Özet Bildiri)
2021
202120. Küçük Hücreli Dışı Akciğer Kanserinde Genetik Olmayan Osimertinib Direnç Mekanizmalarının CRISPR Tarama Aracılı Araştırılması
Uluata Dayanç B., Eriş S., Çakıroğlu E., Mazı F. A., Coşkun Ö. Ş., Demirci D., et al.
XVII. Tıbbi Biyoloji ve Genetik Kongresi, İzmir, Türkiye, 28 - 31 Ekim 2021, (Özet Bildiri)
2021
202121. P62.02 Identification of Essential Genes in Malignant Pleural Mesothelioma Using Genome-Wide CRISPR/Cas9-Based Negative Selection Screen
Çakıroğlu E., Coşkun Ö. Ş., KARAKÜLAH G., ŞENTÜRK Ş.
IASLC 2020 World Conference on Lung Cancer, Singapur, 28 - 31 Ocak 2021, cilt.16, ss.548, (Özet Bildiri)
2020
202022. INSAN MAKROFAJ POLARIZASYONUNDA YENI BIR MODÜLATÖR
Gunalp S., Helvacı D. G., Korkmaz A., Ünüvar Purcu D., Özbilgiç R., Karakülah G., et al.
XXV. Ulusal İmmünoloji Kongresi, İstanbul, Türkiye, 20 - 22 Kasım 2020, (Özet Bildiri)
2019
201923. Hepatoselüler Karsinomanın Gelişiminde FAM134B: Dost Mu?, Düşman Mı?
KELEŞ U., KARAKÜLAH G., İŞCAN E., ERBAK YILMAZ H., SUNER KARAKÜLAH A., ÖZTÜRK M.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Türkiye, 14 - 17 Kasım 2019, (Özet Bildiri)
2019
201924. Mezenkimal Epitelyal Dönüşüm Sürecinde Epigenetik Yeniden Programlamayı Etkileyen Transkripsiyon Faktörlerinin Belirlenmesi
Şengez B., Arslan N., KARAKÜLAH G., ALOTAİBİ H.
Onkolojide İz Bırakanlar Zirvesi, Türkiye, 14 - 16 Kasım 2019, ss.23, (Özet Bildiri)
2019
201925. TAP73ün Hepatoselüler Karsinomada Pro-tümörojenik Rolü
İŞCAN E., YILDIZ G., ÖZ Ö., EKİN U., KELEŞ U., KARAKÜLAH G., et al.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Türkiye, 14 - 17 Kasım 2019, (Özet Bildiri)
2019
201926. Mezenkimal Epitelyal Dönüşüm Sürecinin Epigenetik Altyapısını Düzenleyen Transkripsiyon Faktörlerinin Araştırılması
Şengez B., KARAKÜLAH G., ALOTAİBİ H.
Hezarfen Uluslararası Fen Matematik ve Mühendislik Bilimleri Kongresi, İzmir, Türkiye, 8 - 10 Kasım 2019, ss.1007, (Tam Metin Bildiri)
2019
201927. Mezenkimal Epitelyal Dönüşüm Sürecini Düzenleyen Transkripsyon Faktörlerinin Epigenetik Yeniden Programlama Süreci Üzerindeki Etkilerinin Saptanması
Şengez B., Arslan N., KARAKÜLAH G., ALOTAİBİ H.
12. Tıp Bilişimi Kongresi, Ankara, Türkiye, 15 - 16 Kasım 2019, ss.30-36, (Tam Metin Bildiri)
2019
201928. HEPATOSELLÜLER KARSİNOMDA TGF-Β YANITININ HÜCRESEL MEKANİZMALARININ ARAŞTIRILMASI
DEMİRCİ D., ECE Ç., BENGİSU U. D., KARAKÜLAH G., ÖZTÜRK M., ŞENTÜRK Ş.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Türkiye, 14 - 17 Kasım 2019, (Özet Bildiri)
2019
201929. TAp73’ün hepatoselüler karsinomada tümör teşvik edici rolü
İŞCAN E., YILDIZ G., Öz Ö., Ekin U., Khoury N., KELEŞ U., et al.
16. Ulusal Tıbbi Biyoloji ve Genetik Kongresi (Uluslararası Katılımlı), Muğla, Türkiye, 27 - 30 Ekim 2019, (Özet Bildiri)
2019
201930. Robust Gene Co-Expression Network Analysis
ALIN A., ÖLMEZ A., KARAKÜLAH G.
5th International Researchers, Statisticians and Young Statisticians Congress, 18 - 20 Ekim 2019, (Özet Bildiri)
2019
201931. Investigation of cellular mechanisms of TGF-beta resistance in hepatocellular carcinoma
Demirci D., Çakıroğlu E., KARAKÜLAH G., ÖZTÜRK M., ŞENTÜRK Ş.
3. Çukurova Hepatoselüler Karsinoma Kongresi, Adana, Türkiye, 21 - 23 Şubat 2019
2018
201832. Differential Network Analysis with Partial Least Square Regression
ALIN A., ÖLMEZ A., KARAKÜLAH G., SUNER KARAKÜLAH A.
11th International Statistics Days Conference (11th ISDC2018), Muğla, Türkiye, 3 - 07 Ekim 2018, (Özet Bildiri)
2018
201833. Identification and Annotation of Putative lncRNAs Involved in Mesenchymal-Epithelial Transition
ESKİER D., ŞENGEZ B., ALOTAİBİ H., KARAKÜLAH G.
MOLBİYOLKON 2018 - 6th Interational Congress of the Molecular Biology Association of Turkey, 6 - 08 Eylül 2018, (Özet Bildiri)
2018
201834. Investigation of the Cellular Mechanisms of TGF--induced Senescence-Resistance in Hepatocellular Carcinoma
Demirci D., Çakıroğlu E., Bingöl B., KARAKÜLAH G., ÖZTÜRK M., ŞENTÜRK Ş.
6th International Congress of the Molecular Biology Association of Turkey, 5 - 08 Eylül 2018
2018
201835. Differential network analysis on mouse brain parts using PLSR
ALIN A., ölmez a., KARAKÜLAH G., SUNER KARAKÜLAH A.
4th International Researchers, Statisticians and Young Statisticians Congress (IRSYSC 2018), 28 - 30 Nisan 2018, (Özet Bildiri)
2017
201736. Gene Co-Expression Network Analysis with Partial Least Square Regression
ÖLMEZ A., ALIN A., KARAKÜLAH G., SUNER KARAKÜLAH A.
COSTAS 2017 (International Conference on Computational and Statistical Methods in Applied Sciences) Kongresi, Samsun, Türkiye, 9 - 11 Kasım 2017, (Özet Bildiri)
2017
201737. Gene Co-Expression Network Analysis with Partial Least squares Regression
Ölmez A., ALIN A., KARAKÜLAH G., SUNER KARAKÜLAH A.
International Conference on Computational and Statistical Methods in Applied Sciences, Samsun, Türkiye, 9 - 11 Kasım 2017, (Özet Bildiri)
2017
201738. De-novo assembly of mouse photoreceptor transcriptome identifies un-annotated IncRNAs regulated by NRL
Zelinger L., Karakulah G., Chaitankar V., Kim J., Yang H., Brooks M., et al.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO) - Imaging in the Eye, Maryland, Amerika Birleşik Devletleri, 6 - 11 Mayıs 2017, cilt.58, (Özet Bildiri)
2017
201739. A Search for Common Pre-apoptotic Signals/Pathways in Mouse Models of Retinal Degeneration
Jiang C. K., Brooks M., Karakulah G., Gieser L., Kim J., Boleda A., et al.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO) - Imaging in the Eye, Maryland, Amerika Birleşik Devletleri, 6 - 11 Mayıs 2017, cilt.58, (Özet Bildiri)
2016
201640. Distinct Expression of Heat Shock Proteins in Mouse Models of Retinal Degeneration
Fairless E., Kooragayala K., Karakulah G., Kim J., Boleda A., Cogliati T., et al.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO), Washington, Amerika Birleşik Devletleri, 1 - 05 Mayıs 2016, cilt.57, (Özet Bildiri)
2015
201541. RetSeq: Next Generation Sequencing Database for Exploring Retinal Development, Aging and Disease
Kaya K. D., Brooks M., Yang H., Kim J., Karakulah G., Swaroop A.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO), Colorado, Amerika Birleşik Devletleri, 3 - 07 Mayıs 2015, cilt.56, (Özet Bildiri)
2014
201442. Towards a Web-Based Decision Support Tool for Selecting Appropriate Statistical Test in Medical and Biological Sciences
SUNER KARAKÜLAH A., KARAKÜLAH G., DİCLE O.
25th European Medical Informatics Conference (MIE), İstanbul, Türkiye, 31 Ağustos - 03 Eylül 2014, cilt.205, ss.48-52, (Tam Metin Bildiri)
2014
201443. Computer Based Extraction of Phenoptypic Features of Human Congenital Anomalies from the Digital Literature with Natural Language Processing Techniques
KARAKÜLAH G., DİCLE O., KOŞANER Ö., SUNER KARAKÜLAH A., BİRANT Ç. C., BERBER T., et al.
25th European Medical Informatics Conference (MIE), İstanbul, Türkiye, 31 Ağustos - 03 Eylül 2014, cilt.205, ss.570-574, (Tam Metin Bildiri)
2012
201244. THE SERUM BILIRUBIN LEVELS AND METABOLIC SYNDROME IN SCHIZOPHRENIA PATIENTS: A PROSPECTIVE STUDY
Karadag F., Herken H., Enli Y., Sengul C. B., KARAKÜLAH G., Kaptanoglu B., et al.
20th European Congress of Psychiatry, Prague, Çek Cumhuriyeti, 3 - 06 Mart 2012, cilt.27, (Özet Bildiri)
2012
201245. A data-driven living review for pharmacogenomic decision support in cancer treatment
Karakülah G., SUNER KARAKÜLAH A., Adlassnig K., Samwald M.
24th Medical Informatics in Europe Conference, MIE 2012, Pisa, İtalya, 26 - 29 Ağustos 2012, cilt.180, ss.688-692, (Tam Metin Bildiri)
2007
200746. hasGO: A Gene Ontology Based Web Tool for Functional Analysis and Biological Interpretation of Gene Sets
KARAKÜLAH G., SUNER KARAKÜLAH A., BAYSAL H., UTKU S., DİCLE O.
The Netherlands Bioinformatics Conference 2007, Amsterdam, Hollanda, 16 - 19 Nisan 2007, (Özet Bildiri)
Desteklenen Projeler
2025 - 2028
2025 - 2028FLI1 Transkripsiyon Faktörünün Mesane Kanserinde Tümör Immünitesi ve Immünoterapi Yanıtlarındaki Rolünün Belirlenmesi
TÜBİTAK - AB COST Projesi
Erkek Özhan S. (Yürütücü), Karakülah G., Güngör B., Şentürk Ş.
2025 - 2028
2025 - 2028
Pankreas Kanserinde MECOM'un Biyobelirteç Olarak Tanımlanması ve MECOM İfadesine Bağlı Pankreas Kanseri Hücrelerinde Epigenetik İnhibitör Yanıtının Belirlenmesi
TÜBİTAK - AB COST Projesi
Erkek Özhan S. (Yürütücü), Karakülah G., Sağol Ö., Aysal Ağalar A., Ağalar C., Ünek İ. T., et al.
2024 - 2027
2024 - 2027
Mezenkimal-Epitelyal Dönüşümde C730027H18Rik Geninin Rolü: MET Düzenlemesine Yeni Bir Bakış
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
Alotaibi H. (Yürütücü), Karakülah G.
2023 - 2025
2023 - 2025Kabuki Sendromu ilişkili KMT2D geninin FYR modülünde meydana gelen mutasyonların protein etkileşimlerine ve kromatin organizasyonuna olan etkisinin araştırılması
TÜSEB B Grubu AR-GE Projesi
Erkek Özhan S. (Yürütücü), Oktay Y., Karaca Erek E., Karakülah G., Hız A. S., Ozden Yilmaz G., et al.
2023 - 2024
2023 - 2024HCC gelişiminde EpCAM+ kanser kök hücrelerinin epigenetik regülasyonunda rol oynayan EZH2 aracılıklı H3K27me3 hedefi olan genlerin belirlenmesi
TÜSEB A Grubu Acil AR-GE Projesi
Erdal Bağrıyanık Ş. E. (Yürütücü), Karakülah G., Tercan Avcı S.
Kongre ve Sempozyum Katılımı Faaliyetleri
10 Haziran 2022 - 15 Haziran 2022
10 Haziran 2022 - 15 Haziran 2022The European Human Genetics Conference 2022
Katılımcı
Vienna-Avusturya
Atıflar
Toplam Atıf Sayısı (WOS): 809
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