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SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

RadPhysBio: A Radiobiological Database for the Prediction of Cell Survival upon Exposure to Ionizing Radiation

Zanni V., Papakonstantinou D., Kalospyros S. A., Karaoulanis D., Biz G. M., Manti L., et al.
International Journal of Molecular Sciences , cilt.25, sa.9, 2024 (SCI-Expanded) identifier identifier

Dual Targeting of DNA Damage Response Proteins Implicated in Cancer Radioresistance.

Vasilopoulos S. N., Güner H., Uça Apaydın M., Pavlopoulou A., Georgakilas A. G.
Genes , cilt.14, sa.12, 2023 (SCI-Expanded) identifier

Soft Tissue Ewing Sarcoma Cell Drug Resistance Revisited: A Systems Biology Approach

Asfa S., Toy H. I., Arshinchi Bonab R., Chrousos G. P., Pavlopoulou A., Geronikolou S. A.
International Journal of Environmental Research and Public Health , cilt.20, sa.13, 2023 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

?In the light of evolution:? keratins as exceptional tumor biomarkers

Takan I., Karakulah G., Louka A., Pavlopoulou A.
PEERJ , 2023 (SCI-Expanded) identifier identifier

Whole Genome Analysis of Dizygotic Twins With Autism Reveals Prevalent Transposon Insertion Within Neuronal Regulatory Elements: Potential Implications for Disease Etiology and Clinical Assessment

Okay K., ÜNAL VARIŞ P., MİRAL S., PAVLOPOULOU A., OKTAY Y., KARAKÜLAH G.
JOURNAL OF AUTISM AND DEVELOPMENTAL DISORDERS , sa.3, ss.1091-1106, 2023 (SSCI) identifier identifier

A Counterintuitive Neutrophil-Mediated Pattern in COVID-19 Patients Revealed through Transcriptomics Analysis

Özbek M., Toy H. I., Takan I., Asfa S., Arshinchi Bonab R., Karakülah G., et al.
VIRUSES-BASEL , sa.1, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

An in silico approach to the identification of diagnostic and prognostic markers in low-grade gliomas

Özbek M., Toy H. I., Oktay Y., Karakülah G., SUNER KARAKÜLAH A., Pavlopoulou A.
PeerJ , cilt.11, 2023 (SCI-Expanded) identifier identifier

p73 isoforms meet evolution of metastasis

Logotheti S., Pavlopoulou A., Marquardt S., Takan I., Georgakilas A. G., Stiewe T.
CANCER AND METASTASIS REVIEWS , sa.4, ss.853-869, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Radiation Type- and Dose-Specific Transcriptional Responses across Healthy and Diseased Mammalian Tissues

Sagkrioti E., Biz G. M., Takan I., Asfa S., Nikitaki Z., Zanni V., et al.
ANTIOXIDANTS , cilt.11, sa.11, 2022 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

Identification of neoplasm-specific signatures of miRNA interactions by employing a systems biology approach

Bonab R. A., Asfa S., Kontou P., KARAKÜLAH G., PAVLOPOULOU A.
PEERJ , cilt.10, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

A Modern Approach towards an Industry 4.0 Model: From Driving Technologies to Management

Tsaramirsis G., Kantaros A., Al-Darraji I., Piromalis D., Apostolopoulos C., Pavlopoulou A., et al.
JOURNAL OF SENSORS , cilt.2022, 2022 (SCI-Expanded) Creative Commons License identifier

Ginger for Healthy Ageing: A Systematic Review on Current Evidence of Its Antioxidant, Anti-Inflammatory, and Anticancer Properties.

Ozkur M., BENLİER N., Takan I., Vasileiou C., Georgakilas A. G., Pavlopoulou A., et al.
Oxidative medicine and cellular longevity , cilt.2022, ss.4748447, 2022 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

Novel integrated workflow allows production and in-depth quality assessment of multifactorial reprogrammed skeletal muscle cells from human stem cells.

Faustino D., Brinkmeier H., Logotheti S., Jonitz-Heincke A., Yilmaz H., Takan I., et al.
Cellular and molecular life sciences : CMLS , cilt.79, sa.5, ss.229, 2022 (SCI-Expanded) Creative Commons License identifier identifier

Thrombocytopenia in COVID‑19 and vaccine‑induced thrombotic thrombocytopenia.

Geronikolou S., Pavlopoulou A., Mantzourani M., Chrousos G., Takan I.
International journal of molecular medicine , cilt.49, sa.3, 2022 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

In Silico Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach

PAVLOPOULOU A., Asfa S., Gioukakis E., Mavragani I. V., Nikitaki Z., Takan I., et al.
MOLECULES , cilt.26, sa.24, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

Applications of Healthcare Robots in Combating the COVID-19 Pandemic.

Raje S., Reddy N., Jerbi H., Randhawa P., Tsaramirsis G., Shrivas N. V., et al.
Applied bionics and biomechanics , cilt.2021, ss.7099510, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier

In Silico Methods for the Identification of Diagnostic and Favorable Prognostic Markers in Acute Myeloid Leukemia.

Yilmaz H., Toy H. I., Marquardt S., KARAKÜLAH G., KÜÇÜK C., Kontou P., et al.
International journal of molecular sciences , cilt.22, sa.17, 2021 (SCI-Expanded) identifier identifier

Polycystic οvary syndrome revisited: An interactions network approach.

Geronikolou S. A., Pavlopoulou A., Cokkinos D. V., Bacopoulou F., Chrousos G. P.
European journal of clinical investigation , cilt.51, sa.9, 2021 (SCI-Expanded) identifier identifier identifier

Bioinformatic approaches to the investigation of the atavistic genes implicated in cancer.

Louka A., Takan I., Pavlopoulou A., Georgakilas A. G.
Frontiers in bioscience (Landmark edition) , cilt.26, sa.8, ss.279-311, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach.

Theofylaktou D., Takan I., Karakulah G., Biz G. M., Zanni V., Pavlopoulou A., et al.
Oxidative medicine and cellular longevity , cilt.2021, ss.9993518, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

Interactions Networks for Primary Heart Sarcomas

Geronikolou S. A., Pavlopoulou A., Chrousos G. P., Cokkinos D.
CANCERS , cilt.13, sa.15, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

A Systems-Based Key Innovation-Driven Approach Infers Co-option of Jaw Developmental Programs During Cancer Progression.

Marquardt S., Pavlopoulou A., Takan I., Dhar P., Puetzer B. M., Logotheti S.
Frontiers in cell and developmental biology , cilt.9, ss.682619, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Investigating Molecular Determinants of Cancer Cell Resistance to Ionizing Radiation Through an Integrative Bioinformatics Approach.

Toy H. I., Karakulah G., Kontou P. I., Alotaibi H., Georgakilas A. G., Pavlopoulou A.
Frontiers in cell and developmental biology , cilt.9, ss.620248, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Kisspeptin and the Genetic Obesity Interactome.

Geronikolou S., Pavlopoulou A., Lambrou G., Koutelekos J., Cokkinos D., Albanopoulos K., et al.
Advances in experimental medicine and biology , cilt.1339, ss.111-117, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Neural Networks Recapitulation by Cancer Cells Promotes Disease Progression: A Novel Role of p73 Isoforms in Cancer-Neuronal Crosstalk.

Logotheti S., Marquardt S., Richter C., Hain R. S., Murr N., Takan I., et al.
Cancers , cilt.12, sa.12, 2020 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Codon usage bias in radioresistant bacteria.

Dilucca M., Pavlopoulou A., Georgakilas A. G., Giansanti A.
Gene , cilt.742, ss.144554, 2020 (SCI-Expanded) identifier identifier identifier

Codon Usage and Phenotypic Divergences of SARS-CoV-2 Genes.

Dilucca M., Forcelloni S., Georgakilas A. G., Giansanti A., Pavlopoulou A.
Viruses , cilt.12, sa.5, 2020 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

A Bioinformatic Approach for the Identification of Molecular Determinants of Resistance/Sensitivity to Cancer Thermotherapy.

Duzgun M. B., Theofilatos K., Georgakilas A. G., Pavlopoulou A.
Oxidative medicine and cellular longevity , cilt.2019, ss.4606219, 2019 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

In Silico Phylogenetic and Structural Analyses of Plant Endogenous Danger Signaling Molecules upon Stress.

Pavlopoulou A., KARACA EREK E., Balestrazzi A., Georgakilas A. G.
Oxidative medicine and cellular longevity , cilt.2019, ss.8683054, 2019 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

HOTAIR as a Prognostic Predictor for Diverse Human Cancers: A Meta- and Bioinformatics Analysis.

Toy H. I., Okmen D., Kontou P., Georgakilas A. G., Pavlopoulou A.
Cancers , cilt.11, sa.6, 2019 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Prediction of Gold Nanoparticle and Microwave-Induced Hyperthermia Effects on Tumor Control via a Simulation Approach.

Dimitriou N. M., Pavlopoulou A., Tremi I., Kouloulias V., Tsigaridas G., Georgakilas A. G.
Nanomaterials (Basel, Switzerland) , cilt.9, sa.2, 2019 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Identification of gene expression profiles in myocardial infarction: a systematic review and meta-analysis.

Kontou P., Pavlopoulou A., Braliou G., Bogiatzi S., Dimou N., Bangalore S., et al.
BMC medical genomics , cilt.11, sa.1, ss.109, 2018 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

In silico Phylogenetic Analysis of hAT Transposable Elements in Plants.

KARAKÜLAH G., Pavlopoulou A.
Genes , cilt.9, sa.6, 2018 (SCI-Expanded) identifier identifier identifier

Bipartite graphs in systems biology and medicine: a survey of methods and applications.

Pavlopoulos G. A., Kontou P. I., Pavlopoulou A., Bouyioukos C., Markou E., Bagos P. G.
GigaScience , cilt.7, sa.4, ss.1-31, 2018 (SCI-Expanded) Creative Commons License identifier identifier identifier

The challenge of drug resistance in cancer treatment: a current overview.

Nikolaou M., Pavlopoulou A., Georgakilas A. G., Kyrodimos E.
Clinical & experimental metastasis , cilt.35, sa.4, ss.309-318, 2018 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

RecA: a universal drug target in pathogenic bacteria

Pavlopoulou A.
FRONTIERS IN BIOSCIENCE-LANDMARK , cilt.23, ss.36-42, 2018 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Integrating plant and animal biology for the search of novel DNA damage biomarkers.

Nikitaki Z., Hola M., Dona M., Pavlopoulou A., Michalopoulos I., Angelis K. J., et al.
Mutation research. Reviews in mutation research , cilt.775, ss.21-38, 2018 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Gold nanoparticles, radiations and the immune system: Current insights into the physical mechanisms and the biological interactions of this new alliance towards cancer therapy

Dimitriou N. M., Tsekenis G., Balanikas E. C., Pavlopoulou A., Mitsiogianni M., Mantso T., et al.
PHARMACOLOGY & THERAPEUTICS , cilt.178, ss.1-17, 2017 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Molecular determinants of radiosensitivity in normal and tumor tissue: A bioinformatic approach.

Pavlopoulou A., Bagos P. G., Koutsandrea V., Georgakilas A. G.
Cancer letters , cilt.403, ss.37-47, 2017 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Bridging Plant and Human Radiation Response and DNA Repair through an In Silico Approach

Nikitaki Z., Pavlopoulou A., Hola M., Dona M., Michalopoulos I., Balestrazzi A., et al.
CANCERS , cilt.9, sa.6, 2017 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Unravelling a p73-regulated network: The role of a novel p73-dependent target, MIR3158, in cancer cell migration and invasiveness

Galtsidis S., Logotheti S., Pavlopoulou A., Zampetidis C. P., Papachristopoulou G., Scorilas A., et al.
CANCER LETTERS , cilt.388, ss.96-106, 2017 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Interactome of Obesity: Obesidome Genetic Obesity, Stress Induced Obesity, Pathogenic Obesity Interaction

Geronikolou S. A., PAVLOPOULOU A., Cokkinos D., Chrousos G.
GENEDIS 2016: GENETICS AND NEURODEGENERATION , cilt.987, ss.233-241, 2017 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Determinants of resistance to chemotherapy and ionizing radiation in breast cancer stem cells.

Pavlopoulou A., OKTAY Y., Vougas K., Louka M., Vorgias C. E., Georgakilas A. G.
Cancer letters , cilt.380, sa.2, ss.485-493, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Network analysis of genes and their association with diseases

Kontou P. I., Pavlopoulou A., Dimou N. L., Pavlopoulos G. A., Bagos P. G.
GENE , cilt.590, sa.1, ss.68-78, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Progression of mouse skin carcinogenesis is associated with the orchestrated deregulation of mir-200 family members, mir-205 and their common targets

Skourti E., Logotheti S., Kontos C. K., Pavlopoulou A., Dimoragka P. T., Trougakos I. P., et al.
MOLECULAR CARCINOGENESIS , cilt.55, sa.8, ss.1229-1242, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Unraveling the mechanisms of extreme radioresistance in prokaryotes: Lessons from nature

Pavlopoulou A., Savva G. D., Louka M., Bagos P. G., Vorgias C. E., Michalopoulos I., et al.
MUTATION RESEARCH-REVIEWS IN MUTATION RESEARCH , cilt.767, ss.92-107, 2016 (SCI-Expanded) identifier identifier

Emerging molecular networks common in ionizing radiation, immune and inflammatory responses by employing bioinformatics approaches

Georgakilas A. G., Pavlopoulou A., Louka M., Nikitaki Z., Vorgias C. E., Bagos P. G., et al.
CANCER LETTERS , cilt.368, sa.2, ss.164-172, 2015 (SCI-Expanded) identifier identifier

Human cancer databases

Pavlopoulou A., Spandidos D. A., Michalopoulos I.
ONCOLOGY REPORTS , cilt.33, sa.1, ss.3-18, 2015 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

A Comprehensive Phylogenetic and Structural Analysis of the Carcinoembryonic Antigen (CEA) Gene Family

Pavlopoulou A., Scorilas A.
GENOME BIOLOGY AND EVOLUTION , cilt.6, sa.6, ss.1314-1326, 2014 (SCI-Expanded) Creative Commons License identifier identifier

3D molecular modeling and evolutionary study of the Trypanosoma brucei DNA Topoisomerase IB, as a new emerging pharmacological target

Vlachakis D., Pavlopoulou A., Roubelakis M. G., Feidakis C., Anagnou N. P., Kossida S.
GENOMICS , cilt.103, sa.1, ss.107-113, 2014 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Functions, divergence and clinical value of TAp73 isoforms in cancer

Logotheti S., Pavlopoulou A., Galtsidis S., Vojtesek B., Zoumpourlis V.
CANCER AND METASTASIS REVIEWS , cilt.32, sa.3-4, ss.511-534, 2013 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Unraveling microalgal molecular interactions using evolutionary and structural bioinformatics

Vlachakis D., Pavlopoulou A., Kazazi D., Kossida S.
GENE , cilt.528, sa.2, ss.109-119, 2013 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Antiviral Stratagems Against HIV-1 Using RNA Interference (RNAi) Technology

Vlachakis D., Tsiliki G., Pavlopoulou A., Roubelakis M. G., Tsaniras S. C., Kossida S.
EVOLUTIONARY BIOINFORMATICS , cilt.9, ss.203-213, 2013 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

A Comprehensive Phylogenetic Analysis of Deadenylases

Pavlopoulou A., Vlachakis D., Balatsos N. A. A., Kossida S.
EVOLUTIONARY BIOINFORMATICS , cilt.9, ss.491-497, 2013 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

An Integrated In Silico Approach to Design Specific Inhibitors Targeting Human Poly(A)-Specific Ribonuclease

Vlachakis D., Pavlopoulou A., Tsiliki G., Komiotis D., Stathopoulos C., Balatsos N. A. A., et al.
PLOS ONE , cilt.7, sa.12, 2012 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

The PRINTS database: a fine-grained protein sequence annotation and analysis resource-its status in 2012

Attwood T. K., Coletta A., Muirhead G., Pavlopoulou A., Philippou P. B., Popov I., et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION , 2012 (SCI-Expanded) identifier identifier

State-of-the-art bioinformatics protein structure prediction tools (Review)

Pavlopoulou A., Michalopoulos I.
INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE , cilt.28, sa.3, ss.295-310, 2011 (SCI-Expanded) identifier identifier

Cytosine Methyltransferases as Tumor Markers

Pavlopoulou A., Kossida S.
CURRENT GENOMICS , cilt.11, sa.8, ss.568-577, 2010 (SCI-Expanded) identifier identifier

Evolutionary History of Tissue Kallikreins

Pavlopoulou A., Pampalakis G., Michalopoulos I., Sotiropoulou G.
PLOS ONE , cilt.5, sa.11, 2010 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Phylogenetic analysis of the eukaryotic RNA (cytosine-5)-methyltransferases

Pavlopoulou A., Kossida S.
GENOMICS , cilt.93, sa.4, ss.350-357, 2009 (SCI-Expanded) identifier identifier

Plant cytosine-5 DNA methyltransferases: Structure, function, and molecular evolution

Pavlopoulou A., Kossida S.
GENOMICS , cilt.90, sa.4, ss.530-541, 2007 (SCI-Expanded) identifier identifier

Diğer Dergilerde Yayınlanan Makaleler

Temporal evolution and adaptation of SARS-CoV-2 codon usage.

Posani E., Dilucca M., Forcelloni S., Pavlopoulou A., Georgakilas A. G., Giansanti A.
Frontiers in bioscience (Landmark edition) , cilt.27, sa.1, ss.13, 2022 (Hakemli Dergi) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

Bio-Virus Spread Simulation in Real 3D Space using Augmented Reality

Tsaramirsis K., Patel A., Sharma P., Reddy N., Randhawa P., Tsaramirsis G., et al.
Engineered Science , cilt.16, ss.319-330, 2021 (Scopus)

The human GPCR signal transduction network

Kontou P., Pavlopoulou A., Dimou N., Theodoropoulou M., Braliou G., Tsaousis G., et al.
NETWORK MODELING AND ANALYSIS IN HEALTH INFORMATICS AND BIOINFORMATICS , cilt.10, sa.1, 2021 (ESCI) Sürdürülebilir Kalkınma identifier identifier

Methods of Analysis and Meta-Analysis for Identifying Differentially Expressed Genes.

Kontou P. I., Pavlopoulou A., Bagos P. G.
Methods in molecular biology (Clifton, N.J.) , cilt.1793, ss.183-210, 2018 (Scopus) identifier identifier

Inter-species functional interactome of nuclear steroid receptors (R1).

Geronikolou S. A., Pavlopoulou A., Kanaka-Gantenbein C., Chrousos G.
Frontiers in bioscience (Elite edition) , cilt.10, sa.2, ss.208-228, 2018 (Scopus) identifier

Data and programs in support of network analysis of genes and their association with diseases

Kontou P. I., Pavlopoulou A., Dimou N. L., Pavlopoulos G. A., Bagos P. G.
DATA IN BRIEF , cilt.8, ss.1036-1039, 2016 (ESCI) Sürdürülebilir Kalkınma identifier identifier

Cathelicidins Revisited: Molecular Evolution, Structure and Functional Implications

Pavlopoulou A.
International Journal of Systems Biology and Biomedical Technologies (IJSBBT) , cilt.2, sa.2, ss.8-32, 2013 (Hakemli Dergi)

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

Algorithm-based approach to uncover potential microRNAs related to cancers of the gastrointestinal track

Asfa S., Bonab R. A., Pavlopoulou A., Işik Z.
International Biotechnology Congress, İstanbul, Türkiye, 9 - 11 Eylül 2021, ss.132-137 Sürdürülebilir Kalkınma

Metrikler

Yayın

69

Atıf (WoS)

2146

H-İndeks (WoS)

22

Proje

3

Tez Danışmanlığı

7

Açık Erişim

21
BM Sürdürülebilir Kalkınma Amaçları