Yayınlar & Eserler

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SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

Generation of Anterior Segment of the Eye Cells from hiPSCs in Microfluidic Platforms

Koçak G., Uyulgan S., Polatlı E., Sarı V., Kahveci B., Bursali A., et al.
Advanced Biology , 2024 (SCI-Expanded) identifier identifier

FLI1 and FRA1 transcription factors drive the transcriptional regulatory networks characterizing muscle invasive bladder cancer

Guneri-Sozeri P. Y., Özden-Yılmaz G., Kisim A., Cakiroglu E., Eray A., Uzuner H., et al.
COMMUNICATIONS BIOLOGY , cilt.6, sa.1, 2023 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

An API for dynamic estimation of reference intervals for functional abundances of gut microbiota

Binokay L., OKTAY Y., KARAKÜLAH G.
BIOLOGIA , 2023 (SCI-Expanded) identifier identifier

TRAIL promotes the polarization of human macrophages toward a proinflammatory M1 phenotype and is associated with increased survival in cancer patients with high tumor macrophage content

Gunalp S., Helvaci D. G., Oner A., Bursalı A., Conforte A., GÜNER H., et al.
FRONTIERS IN IMMUNOLOGY , 2023 (SCI-Expanded) Creative Commons License identifier identifier identifier

?In the light of evolution:? keratins as exceptional tumor biomarkers

Takan I., Karakulah G., Louka A., Pavlopoulou A.
PEERJ , 2023 (SCI-Expanded) identifier identifier

Whole Genome Analysis of Dizygotic Twins With Autism Reveals Prevalent Transposon Insertion Within Neuronal Regulatory Elements: Potential Implications for Disease Etiology and Clinical Assessment

Okay K., ÜNAL VARIŞ P., MİRAL S., PAVLOPOULOU A., OKTAY Y., KARAKÜLAH G.
JOURNAL OF AUTISM AND DEVELOPMENTAL DISORDERS , sa.3, ss.1091-1106, 2023 (SSCI) identifier identifier

Differential Occupancy and Regulatory Interactions of KDM6A in Bladder Cell Lines

Özden-Yılmaz G., Savas B., Bursalı A., Eray A., Arıbaş A., ŞENTÜRK Ş., et al.
CELLS , sa.6, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Shared Biological Pathways and Processes in Patients with Intellectual Disability: A Multicenter Study

Günay Ç., Aykol D., Özsoy Ö., Sönmezler E., Hancı Y. S., Kara B., et al.
Neuropediatrics , cilt.54, sa.4, ss.225-238, 2023 (SCI-Expanded) identifier identifier

A Counterintuitive Neutrophil-Mediated Pattern in COVID-19 Patients Revealed through Transcriptomics Analysis

Özbek M., Toy H. I., Takan I., Asfa S., Arshinchi Bonab R., Karakülah G., et al.
VIRUSES-BASEL , sa.1, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Benchmarking the accuracy of structure-based binding affinity predictors on Spike–ACE2 deep mutational interaction set

Ozden B., Şamiloğlu E., Özsan A., Erguven M., Yükrük C., Koşaca M., et al.
Proteins: Structure, Function and Bioinformatics , 2023 (SCI-Expanded) identifier identifier

An in silico approach to the identification of diagnostic and prognostic markers in low-grade gliomas

Özbek M., Toy H. I., Oktay Y., Karakülah G., SUNER KARAKÜLAH A., Pavlopoulou A.
PeerJ , cilt.11, 2023 (SCI-Expanded) identifier identifier

Identification of neoplasm-specific signatures of miRNA interactions by employing a systems biology approach

Bonab R. A., Asfa S., Kontou P., KARAKÜLAH G., PAVLOPOULOU A.
PEERJ , cilt.10, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Investigating Partners in Crime: Osimertinib Resistance Mechanisms in Non-small Cell Lung Cancer Using Focused CRISPR Screen

Dayanc B. U., Eris S., Cakiroglu E., Mazi F. A., COŞKUN BADUR S., Demirci D., et al.
JOURNAL OF THORACIC ONCOLOGY , sa.9, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier

Genome-wide CRISPR screen identifies BUB1 as a cancer-dependency gene in malignant pleural mesothelioma

Cakiroglu E., ŞENTÜRK Ş., KARAKÜLAH G.
FEBS OPEN BIO , ss.18, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier

Alteration of miRNAs in Small Neuron-Derived Extracellular Vesicles of Alzheimer's Disease Patients and the Effect of Extracellular Vesicles on Microglial Immune Responses.

Durur D. Y., Tastan B., Tufekci K. U., Olcum M., Uzuner H., Karakulah G., et al.
Journal of molecular neuroscience : MN , cilt.72, sa.6, ss.1182-1194, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Repeat expression is linked to patient survival and exhibits single nucleotide variation in pancreatic cancer revealing LTR70:r.879A>G

Yandim C., KARAKÜLAH G.
GENE , cilt.822, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

TAp73 alpha is Upregulated in the Most Common Human Cancers

Iscan E., Karakulah G., Ekin U., Ozturk M., Uzuner H., SUNER KARAKÜLAH A.
MOLECULAR BIOLOGY , cilt.56, sa.2, ss.251-256, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier

Transcriptome Dynamics of Human Neuronal Differentiation From iPSC

Kurus M., Akbari S., Eskier D., Bursali A., Ergin K., Erdal E., et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY , cilt.9, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

In Silico Methods for the Identification of Diagnostic and Favorable Prognostic Markers in Acute Myeloid Leukemia.

Yilmaz H., Toy H. I., Marquardt S., KARAKÜLAH G., KÜÇÜK C., Kontou P., et al.
International journal of molecular sciences , cilt.22, sa.17, 2021 (SCI-Expanded) identifier identifier

Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach.

Theofylaktou D., Takan I., Karakulah G., Biz G. M., Zanni V., Pavlopoulou A., et al.
Oxidative medicine and cellular longevity , cilt.2021, ss.9993518, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

Modulation of macrophage polarization by TNF-related apoptosis-inducing ligand

Gunalp S., Helvaci D. G., KARAKÜLAH G., Sag D.
EUROPEAN JOURNAL OF IMMUNOLOGY , cilt.51, ss.214, 2021 (SCI-Expanded) identifier

Different selection dynamics of S and RdRp between SARS-CoV-2 genomes with and without the dominant mutations

Kochan N., Eskier D., SUNER KARAKÜLAH A., Karakulah G., OKTAY Y.
INFECTION GENETICS AND EVOLUTION , cilt.91, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Alternative splicing and gene co-expression network-based analysis of dizygotic twins with autism-spectrum disorder and their parents

Okay K., Varis P. U., Miral S., Ekinci B., Yaras T., KARAKÜLAH G., et al.
GENOMICS , cilt.113, sa.4, ss.2561-2571, 2021 (SCI-Expanded) identifier identifier identifier

Investigating Molecular Determinants of Cancer Cell Resistance to Ionizing Radiation Through an Integrative Bioinformatics Approach.

Toy H. I., Karakulah G., Kontou P. I., Alotaibi H., Georgakilas A. G., Pavlopoulou A.
Frontiers in cell and developmental biology , cilt.9, ss.620248, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Identification of Essential Genes in Malignant Pleural Mesothelioma Using Genome-Wide CRISPR/Cas9-Based Negative Selection Screen

Cakiroglu E., Coskun O., Karakulah G., Senturk Ş.
JOURNAL OF THORACIC ONCOLOGY , sa.3, 2021 (SCI-Expanded) identifier

Current mutatome of SARS-CoV-2 in Turkey reveals mutations of interest.

Eskier D., Akalp E., Dalan Ö., KARAKÜLAH G., OKTAY Y.
Turkish journal of biology = Turk biyoloji dergisi , cilt.45, sa.1, ss.104-113, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

TAp73β Can Promote Hepatocellular Carcinoma Dedifferentiation

Iscan E., Ekin U., Yildiz G., Oz O., Keles U., Suner Karakülah A., et al.
CANCERS , sa.4, 2021 (SCI-Expanded) identifier identifier identifier

Identification of differentially expressed genomic repeats in primary hepatocellular carcinoma and their potential links to biological processes and survival

Karakulah G., Yandim C.
TURKISH JOURNAL OF BIOLOGY , cilt.45, sa.5, ss.599-612, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

In Silico Identification of Stress-Associated Transposable Elements in Arabidopsis thaliana Using Public Transcriptome Data

Eskier D., KARAKÜLAH G.
PLANT TRANSPOSABLE ELEMENTS , cilt.2250, ss.15-30, 2021 (SCI-Expanded) identifier identifier

Differential expression of full-length and NH<sub>2</sub> terminally truncated FAM134B isoforms in normal physiology and cancer.

Keles U., Iscan E., Yilmaz H. E., Karakulah G., SUNER KARAKÜLAH A., Bal E., et al.
American journal of physiology. Gastrointestinal and liver physiology , cilt.319, sa.6, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Mutations of SARS-CoV-2 nsp14 exhibit strong association with increased genome-wide mutation load

Eskier D., SUNER KARAKÜLAH A., OKTAY Y., KARAKÜLAH G.
PEERJ , cilt.8, 2020 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Analysis of open chromatin regions in bladder cancer links beta-catenin mutations and Wnt signaling with neuronal subtype of bladder cancer

Eray A., Gueneri P. Y., Yilmaz G. O., Karakuelah G., Erkek-Ozhan S.
SCIENTIFIC REPORTS , cilt.10, sa.1, 2020 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Mutation density changes in SARS-CoV-2 are related to the pandemic stage but to a lesser extent in the dominant strain with mutations in spike and RdRp

Eskier D., SUNER KARAKÜLAH A., KARAKÜLAH G., OKTAY Y.
PEERJ , cilt.8, 2020 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

RdRp mutations are associated with SARS-CoV-2 genome evolution

Eskier D., KARAKÜLAH G., SUNER KARAKÜLAH A., OKTAY Y.
PEERJ , cilt.8, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Signature changes in the expressions of protein-coding genes, lncRNAs, and repeat elements in early and late cellular senescence

KARAKÜLAH G., Yandim C.
TURKISH JOURNAL OF BIOLOGY , cilt.44, sa.6, ss.356-370, 2020 (SCI-Expanded) identifier identifier identifier

TEffectR: an R package for studying the potential effects of transposable elements on gene expression with linear regression model

Karakulah G., Arslan N., Yandim C., SUNER KARAKÜLAH A.
PEERJ , cilt.7, 2019 (SCI-Expanded) identifier identifier identifier

Dysregulated expression of repetitive DNA in ER+/HER2-breast cancer

Yandim C., KARAKÜLAH G.
CANCER GENETICS , cilt.239, ss.36-45, 2019 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Expression dynamics of repetitive DNA in early human embryonic development

Yandim C., KARAKÜLAH G.
BMC GENOMICS , cilt.20, 2019 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

C-Reactive Protein and Platelet-Lymphocyte Ratio as Potential Tumor Markers in Low-Alpha-Fetoprotein Hepatocellular Carcinoma

SUNER KARAKÜLAH A., Carr B. I., AKKIZ H., KARAKÜLAH G., ÜSKÜDAR O., YALÇIN K., et al.
ONCOLOGY , cilt.96, sa.1, ss.25-32, 2019 (SCI-Expanded) identifier identifier identifier

RTFAdb: A database of computationally predicted associations between retrotransposons and transcription factors in the human and mouse genomes

KARAKÜLAH G.
GENOMICS , cilt.110, sa.5, ss.257-262, 2018 (SCI-Expanded) identifier identifier identifier

In silico Phylogenetic Analysis of hAT Transposable Elements in Plants.

KARAKÜLAH G., Pavlopoulou A.
Genes , cilt.9, sa.6, 2018 (SCI-Expanded) identifier identifier identifier

PlanTEnrichment: A tool for enrichment analysis of transposable elements in plants

KARAKÜLAH G., SUNER KARAKÜLAH A.
GENOMICS , cilt.109, ss.336-340, 2017 (SCI-Expanded) identifier identifier identifier

Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL

Zelinger L., KARAKÜLAH G., Chaitankar V., Kim J., Yang H., Brooks M. J., et al.
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE , cilt.58, sa.11, ss.4422-4435, 2017 (SCI-Expanded) Creative Commons License identifier identifier identifier

MicroRNA exocytosis by large dense-core vesicle fusion

Gumurdu A., Yildiz R., Eren E., KARAKÜLAH G., Unver T., GENÇ Ş., et al.
SCIENTIFIC REPORTS , cilt.7, 2017 (SCI-Expanded) Creative Commons License identifier identifier identifier

PeTMbase: A Database of Plant Endogenous Target Mimics (eTMs)

KARAKÜLAH G., Kurtoglu K. Y., Unver T.
PLOS ONE , cilt.11, sa.12, 2016 (SCI-Expanded) identifier identifier identifier

Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research

Chaitankar V., KARAKÜLAH G., Ratnapriya R., Giuste F. O., Brooks M. J., Swaroop A.
PROGRESS IN RETINAL AND EYE RESEARCH , cilt.55, ss.1-31, 2016 (SCI-Expanded) identifier identifier identifier

NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors

Kim J., Yang H., Brooks M. J., Zelinger L., KARAKÜLAH G., Gotoh N., et al.
CELL REPORTS , cilt.17, sa.9, ss.2460-2473, 2016 (SCI-Expanded) identifier identifier identifier

sandflyDST: a dynamic web-based decision support tool for the morphological identification of sandflies present in Anatolia and mainland Europe, and user study

KARAKÜLAH G., Karakus M., SUNER KARAKÜLAH A., Demir S., Arserim S. K., Toz S., et al.
MEDICAL AND VETERINARY ENTOMOLOGY , cilt.30, sa.3, ss.321-329, 2016 (SCI-Expanded) identifier identifier identifier

StatXFinder: a web-based self-directed tool that provides appropriate statistical test selection for biomedical researchers in their scientific studies

SUNER KARAKÜLAH A., KARAKÜLAH G., KOŞANER Ö., DİCLE O.
SPRINGERPLUS , cilt.4, 2015 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

corRECTreatment: A web-based decision support tool for rectal cancer treatment that uses the analytic hierarchy process and decision tree

SUNER KARAKÜLAH A., Karakuelah G., Dicle O., Soekmen S., Celikoglu C. C.
APPLIED CLINICAL INFORMATICS , cilt.6, sa.1, ss.56-74, 2015 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Early Biventricular Molecular Responses to an Acute Myocardial Infarction

Erdal C., KARAKÜLAH G., Fermanci E., Kunter I., Silistreli E. E., Canda T., et al.
INTERNATIONAL JOURNAL OF MEDICAL SCIENCES , cilt.9, sa.1, ss.74-82, 2012 (SCI-Expanded) Creative Commons License identifier identifier identifier

Genome-Wide Gene Expression Analysis of NIH 3T3 Cell Line Under Mechanical Stimulation

Demirci E. K., Demirci T., Trzewik J., Linder P., KARAKÜLAH G., Artmann G. M., et al.
CELLULAR AND MOLECULAR BIOENGINEERING , cilt.4, sa.1, ss.46-55, 2011 (SCI-Expanded) identifier identifier

mESAdb: microRNA Expression and Sequence Analysis Database

Kaya K. D., KARAKÜLAH G., Yakicier C. M., ACAR A. C., KONU KARAKAYALI Ö.
NUCLEIC ACIDS RESEARCH , cilt.39, 2011 (SCI-Expanded) identifier identifier identifier

Diğer Dergilerde Yayınlanan Makaleler

PlanTEnrichment: A How-to Guide on Rapid Identification of Transposable Elements Associated with Regions of Interest in Select Plant Genomes

Eskier D., Arıbaş A., KARAKÜLAH G.
Methods in molecular biology (Clifton, N.J.) , cilt.2703, ss.59-70, 2023 (Scopus) identifier identifier

Evaluation of ATAD2 as a Potential Target in Hepatocellular Carcinoma

Ekin U., Yuzugullu H., Ozen C., Korhan P., Bagirsakci E., Yilmaz F., et al.
JOURNAL OF GASTROINTESTINAL CANCER , cilt.52, sa.4, ss.1356-1369, 2021 (ESCI) Sürdürülebilir Kalkınma identifier identifier

Discovery and Annotation of Plant Endogenous Target Mimicry Sequences from Public Transcriptome Libraries: A Case Study of Prunus persica

KARAKÜLAH G.
JOURNAL OF INTEGRATIVE BIOINFORMATICS , cilt.14, sa.4, 2017 (ESCI) identifier identifier identifier

Differential Expression of Hyperhydricity Responsive Peach MicroRNAs

Diler E., Unver T., KARAKÜLAH G.
JOURNAL OF INTEGRATIVE BIOINFORMATICS , cilt.13, sa.5, 2016 (ESCI) identifier identifier identifier

Computer Based Extraction of Phenoptypic Features of Human Congenital Anomalies from the Digital Literature with Natural Language Processing Techniques

KARAKÜLAH G., DİCLE O., SÜMER A., KOŞANER Ö., BİRANT Ç. C., BERBER T., et al.
Studies in Health Technology and Informatics , cilt.205, ss.570-574, 2014 (Scopus)

Towards a Web-Based Decision Support Tool for Selecting Appropriate Statistical Test in Medical and Biological Sciences

SÜMER A., KARAKÜLAH G., DİCLE O.
Studies in Health Technology and Informatics , cilt.205, ss.48-52, 2014 (Scopus)

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

A molecular portrait of retinoids and EZH2 inhibitors cooperation to orchestrate cytotoxic effects on bladder cancer cells

Özgün G., Yaraş T., Landman N., KARAKÜLAH G., van Lohuizen M., ŞENTÜRK Ş., et al.
The 47th FEBS Congress, 8 - 12 Temmuz 2023, cilt.13

On-chip platform for derivation of ocular cells from hiPSCs

Kocak G., Uyulgan S., Polatli E., Sari V., Kahveci B., Bursali A., et al.
European Chapter of the Tissue-Engineering-and-Regenerative-Medicine-International-Society (TERMIS), Manchester, İngiltere, 28 - 31 Mart 2023 identifier

Development of a pipeline for the analysis of the regulatory functions of transposable elements in accessible genomic regions

Eskier D., Yetkin S., Arslan N., Erkek S., ALOTAİBİ H., KARAKÜLAH G.
14. Türk Tıp Bilişimi Kongresi, İzmir, Türkiye, 16 - 18 Mart 2023

Metabolomics analysis of iPSCs derived organoids

Sarı V., KOÇAK G., REÇBER T., KARAKÜLAH G., YILDIRIM C. A., NEMUTLU E., et al.
15th International Symposium on Health Informatics and Bioinformatics, Mersin, Türkiye, 20 - 21 Ekim 2022

Transcriptomic profiling of induced pluripotent stem cell derived eye field cells

Kahveci B., KOÇAK G., YILDIRIM C. A., Mardinoğlu A., KARAKÜLAH G., GÜVEN S.
15th International Symposium on Health Informatics and Bioinformatics, Mersin, Türkiye, 20 - 21 Ekim 2022

Investigating Partners in Crime: Osimertinib Resistance Mechanisms in Non-small Cell Lung Cancer Using Focused CRISPR Screen

Dayanç B., Eriş S., Çakıroğlu E., Mazı F. A., Coşkun Ö. Ş., Demirci D., et al.
IASLC 2022 WCLC World Conference on Lung Cancer, Vienna, Avusturya, 6 - 09 Ağustos 2022, cilt.17, ss.407

Genome-wide CRISPR screen identifies BUB1 as a cancer-dependency gene in malignant pleural mesothelioma

Cakiroglu E., Şentürk Ş., Karakülah G.
IUBMB-FEBS-PABMB 2022 Congress, Lisbon, Portekiz, 9 - 14 Temmuz 2022, cilt.12, ss.18 Sürdürülebilir Kalkınma

THE EFFECT OF HISTONE VARIANT H2A.Z-1 KNOCKDOWN IN EPITHELIAL TO MESENCHYMAL TRANSITION

Yıldız Ş. N., Özkuru E., Kutlu N. K., KARAKÜLAH G., ALOTAİBİ H., Dimitrov S.
8th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon’22), Türkiye, 9 - 12 Haziran 2022

EPIGENETIC REGULATION OF EPITHELIAL TO MESENCHYMAL TRANSITION BY HISTONE VARIANT H3.3A

Özkuru E., Yıldız Ş. N., Kutlu N. K., KARAKÜLAH G., Dimitrov S., ALOTAİBİ H.
8th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon’22), İstanbul, Türkiye, 9 - 12 Haziran 2022

Functional Analysis of Noncoding RNAs Critical to the Mesenchymal Epithelial Transformation Process

Özkan A., Eskier D., KARAKÜLAH G., ALOTAİBİ H.
8th International Congress of the Molecular Biology Association of Turkey, İstanbul, Türkiye, 9 - 12 Haziran 2022

Küçük Hücreli Dışı Akciğer Kanserinde Genetik Olmayan Osimertinib Direnç Mekanizmalarının CRISPR Tarama Aracılı Araştırılması

Uluata Dayanç B., Eriş S., Çakıroğlu E., Mazı F. A., Coşkun Ö. Ş., Demirci D., et al.
XVII. Tıbbi Biyoloji ve Genetik Kongresi, İzmir, Türkiye, 28 - 31 Ekim 2021 Sürdürülebilir Kalkınma

P62.02 Identification of Essential Genes in Malignant Pleural Mesothelioma Using Genome-Wide CRISPR/Cas9-Based Negative Selection Screen

Çakıroğlu E., Coşkun Ö. Ş., KARAKÜLAH G., ŞENTÜRK Ş.
IASLC 2020 World Conference on Lung Cancer, Singapur, 28 - 31 Ocak 2021, cilt.16, ss.548

INSAN MAKROFAJ POLARIZASYONUNDA YENI BIR MODÜLATÖR

Gunalp S., Helvacı D. G., Korkmaz A., Ünüvar Purcu D., Özbilgiç R., Karakülah G., et al.
XXV. Ulusal İmmünoloji Kongresi, İstanbul, Türkiye, 20 - 22 Kasım 2020

Hepatoselüler Karsinomanın Gelişiminde FAM134B: Dost Mu?, Düşman Mı?

KELEŞ U., KARAKÜLAH G., İŞCAN E., ERBAK YILMAZ H., SUNER KARAKÜLAH A., ÖZTÜRK M.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Türkiye, 14 - 17 Kasım 2019

Mezenkimal Epitelyal Dönüşüm Sürecinde Epigenetik Yeniden Programlamayı Etkileyen Transkripsiyon Faktörlerinin Belirlenmesi

Şengez B., Arslan N., KARAKÜLAH G., ALOTAİBİ H.
Onkolojide İz Bırakanlar Zirvesi, Türkiye, 14 - 16 Kasım 2019, ss.23

TAP73ün Hepatoselüler Karsinomada Pro-tümörojenik Rolü

İŞCAN E., YILDIZ G., ÖZ Ö., EKİN U., KELEŞ U., KARAKÜLAH G., et al.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Türkiye, 14 - 17 Kasım 2019

Mezenkimal Epitelyal Dönüşüm Sürecinin Epigenetik Altyapısını Düzenleyen Transkripsiyon Faktörlerinin Araştırılması

Şengez B., KARAKÜLAH G., ALOTAİBİ H.
Hezarfen Uluslararası Fen Matematik ve Mühendislik Bilimleri Kongresi, İzmir, Türkiye, 8 - 10 Kasım 2019, ss.1007

Mezenkimal Epitelyal Dönüşüm Sürecini Düzenleyen Transkripsyon Faktörlerinin Epigenetik Yeniden Programlama Süreci Üzerindeki Etkilerinin Saptanması

Şengez B., Arslan N., KARAKÜLAH G., ALOTAİBİ H.
12. Tıp Bilişimi Kongresi, Ankara, Türkiye, 15 - 16 Kasım 2019, ss.30-36

HEPATOSELLÜLER KARSİNOMDA TGF-Β YANITININ HÜCRESEL MEKANİZMALARININ ARAŞTIRILMASI

DEMİRCİ D., ECE Ç., BENGİSU U. D., KARAKÜLAH G., ÖZTÜRK M., ŞENTÜRK Ş.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Türkiye, 14 - 17 Kasım 2019

TAp73’ün hepatoselüler karsinomada tümör teşvik edici rolü

İŞCAN E., YILDIZ G., Öz Ö., Ekin U., Khoury N., KELEŞ U., et al.
16. Ulusal Tıbbi Biyoloji ve Genetik Kongresi (Uluslararası Katılımlı), Muğla, Türkiye, 27 - 30 Ekim 2019

Robust Gene Co-Expression Network Analysis

ALIN A., ÖLMEZ A., KARAKÜLAH G.
5th International Researchers, Statisticians and Young Statisticians Congress, 18 - 20 Ekim 2019

Investigation of cellular mechanisms of TGF-beta resistance in hepatocellular carcinoma

Demirci D., Çakıroğlu E., KARAKÜLAH G., ÖZTÜRK M., ŞENTÜRK Ş.
3. Çukurova Hepatoselüler Karsinoma Kongresi, Adana, Türkiye, 21 - 23 Şubat 2019

Differential Network Analysis with Partial Least Square Regression

ALIN A., ÖLMEZ A., KARAKÜLAH G., SUNER KARAKÜLAH A.
11th International Statistics Days Conference (11th ISDC2018), Muğla, Türkiye, 3 - 07 Ekim 2018

Investigation of the Cellular Mechanisms of TGF--induced Senescence-Resistance in Hepatocellular Carcinoma

Demirci D., Çakıroğlu E., Bingöl B., KARAKÜLAH G., ÖZTÜRK M., ŞENTÜRK Ş.
6th International Congress of the Molecular Biology Association of Turkey, 5 - 08 Eylül 2018

Identification and Annotation of Putative lncRNAs Involved in Mesenchymal-Epithelial Transition

ESKİER D., ŞENGEZ B., ALOTAİBİ H., KARAKÜLAH G.
MOLBİYOLKON 2018 - 6th Interational Congress of the Molecular Biology Association of Turkey, 6 - 08 Eylül 2018

Differential network analysis on mouse brain parts using PLSR

ALIN A., ölmez a., KARAKÜLAH G., SUNER KARAKÜLAH A.
4th International Researchers, Statisticians and Young Statisticians Congress (IRSYSC 2018), 28 - 30 Nisan 2018

Gene Co-Expression Network Analysis with Partial Least Square Regression

ÖLMEZ A., ALIN A., KARAKÜLAH G., SUNER KARAKÜLAH A.
COSTAS 2017 (International Conference on Computational and Statistical Methods in Applied Sciences) Kongresi, Samsun, Türkiye, 9 - 11 Kasım 2017

Gene Co-Expression Network Analysis with Partial Least squares Regression

Ölmez A., ALIN A., KARAKÜLAH G., SUNER KARAKÜLAH A.
International Conference on Computational and Statistical Methods in Applied Sciences, Samsun, Türkiye, 9 - 11 Kasım 2017

De-novo assembly of mouse photoreceptor transcriptome identifies un-annotated IncRNAs regulated by NRL

Zelinger L., Karakulah G., Chaitankar V., Kim J., Yang H., Brooks M., et al.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO) - Imaging in the Eye, Maryland, Amerika Birleşik Devletleri, 6 - 11 Mayıs 2017, cilt.58 identifier

A Search for Common Pre-apoptotic Signals/Pathways in Mouse Models of Retinal Degeneration

Jiang C. K., Brooks M., Karakulah G., Gieser L., Kim J., Boleda A., et al.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO) - Imaging in the Eye, Maryland, Amerika Birleşik Devletleri, 6 - 11 Mayıs 2017, cilt.58 identifier

Distinct Expression of Heat Shock Proteins in Mouse Models of Retinal Degeneration

Fairless E., Kooragayala K., Karakulah G., Kim J., Boleda A., Cogliati T., et al.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO), Washington, Amerika Birleşik Devletleri, 1 - 05 Mayıs 2016, cilt.57 identifier

RetSeq: Next Generation Sequencing Database for Exploring Retinal Development, Aging and Disease

Kaya K. D., Brooks M., Yang H., Kim J., Karakulah G., Swaroop A.
Annual Meeting of the Association-for-Research-in-Vision-and-Ophthalmology (ARVO), Colorado, Amerika Birleşik Devletleri, 3 - 07 Mayıs 2015, cilt.56 identifier

Computer Based Extraction of Phenoptypic Features of Human Congenital Anomalies from the Digital Literature with Natural Language Processing Techniques

KARAKÜLAH G., DİCLE O., KOŞANER Ö., SUNER KARAKÜLAH A., BİRANT Ç. C., BERBER T., et al.
25th European Medical Informatics Conference (MIE), İstanbul, Türkiye, 31 Ağustos - 03 Eylül 2014, cilt.205, ss.570-574 identifier identifier identifier

Towards a Web-Based Decision Support Tool for Selecting Appropriate Statistical Test in Medical and Biological Sciences

SUNER KARAKÜLAH A., KARAKÜLAH G., DİCLE O.
25th European Medical Informatics Conference (MIE), İstanbul, Türkiye, 31 Ağustos - 03 Eylül 2014, cilt.205, ss.48-52 Sürdürülebilir Kalkınma identifier identifier identifier

A data-driven living review for pharmacogenomic decision support in cancer treatment

Karakülah G., SUNER KARAKÜLAH A., Adlassnig K., Samwald M.
24th Medical Informatics in Europe Conference, MIE 2012, Pisa, İtalya, 26 - 29 Ağustos 2012, cilt.180, ss.688-692 Sürdürülebilir Kalkınma identifier identifier identifier

hasGO: A Gene Ontology Based Web Tool for Functional Analysis and Biological Interpretation of Gene Sets

KARAKÜLAH G., SUNER KARAKÜLAH A., BAYSAL H., UTKU S., DİCLE O.
The Netherlands Bioinformatics Conference 2007, Amsterdam, Hollanda, 16 - 19 Nisan 2007

Metrikler

Yayın

100

Atıf (WoS)

498

H-İndeks (WoS)

11

Atıf (Scopus)

523

H-İndeks (Scopus)

12

Atıf (Scholar)

144

H-İndeks(Scholar)

4

Proje

21

Tez Danışmanlığı

6

Açık Erişim

21
BM Sürdürülebilir Kalkınma Amaçları