SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler
Generation of Anterior Segment of the Eye Cells from hiPSCs in Microfluidic Platforms
Benchmarking the accuracy of structure-based binding affinity predictors on Spike–ACE2 deep mutational interaction set
Proteins: Structure, Function and Bioinformatics
, cilt.92, sa.4, ss.529-539, 2024 (SCI-Expanded)


Expressions of the satellite repeat HSAT5 and transposable elements are implicated in disease progression and survival in glioma
An API for dynamic estimation of reference intervals for functional abundances of gut microbiota
Differential Occupancy and Regulatory Interactions of KDM6A in Bladder Cell Lines
?In the light of evolution:? keratins as exceptional tumor biomarkers
Shared Biological Pathways and Processes in Patients with Intellectual Disability: A Multicenter Study
A Counterintuitive Neutrophil-Mediated Pattern in COVID-19 Patients Revealed through Transcriptomics Analysis
An in silico approach to the identification of diagnostic and prognostic markers in low-grade gliomas
Identification of neoplasm-specific signatures of miRNA interactions by employing a systems biology approach
TAp73 alpha is Upregulated in the Most Common Human Cancers
Transcriptome Dynamics of Human Neuronal Differentiation From iPSC
Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach.
Oxidative medicine and cellular longevity
, cilt.2021, ss.9993518, 2021 (SCI-Expanded)




Modulation of macrophage polarization by TNF-related apoptosis-inducing ligand
EUROPEAN JOURNAL OF IMMUNOLOGY
, cilt.51, ss.214, 2021 (SCI-Expanded)

Alternative splicing and gene co-expression network-based analysis of dizygotic twins with autism-spectrum disorder and their parents
Current mutatome of SARS-CoV-2 in Turkey reveals mutations of interest.
Turkish journal of biology = Turk biyoloji dergisi
, cilt.45, sa.1, ss.104-113, 2021 (SCI-Expanded)




TAp73β Can Promote Hepatocellular Carcinoma Dedifferentiation
In Silico Identification of Stress-Associated Transposable Elements in Arabidopsis thaliana Using Public Transcriptome Data
Identification of differentially expressed genomic repeats in primary hepatocellular carcinoma and their potential links to biological processes and survival
Mutations of SARS-CoV-2 nsp14 exhibit strong association with increased genome-wide mutation load
RdRp mutations are associated with SARS-CoV-2 genome evolution
PEERJ
, cilt.8, 2020 (SCI-Expanded)




PlumX Metrics

- Citations
- Citation Indexes: 49
- Captures
- Readers: 148
- Mentions
- Blog Mentions: 1
- News Mentions: 1
Signature changes in the expressions of protein-coding genes, lncRNAs, and repeat elements in early and late cellular senescence
Dysregulated expression of repetitive DNA in ER+/HER2-breast cancer
Expression dynamics of repetitive DNA in early human embryonic development
C-Reactive Protein and Platelet-Lymphocyte Ratio as Potential Tumor Markers in Low-Alpha-Fetoprotein Hepatocellular Carcinoma
RTFAdb: A database of computationally predicted associations between retrotransposons and transcription factors in the human and mouse genomes
PlanTEnrichment: A tool for enrichment analysis of transposable elements in plants
Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE
, cilt.58, sa.11, ss.4422-4435, 2017 (SCI-Expanded)




MicroRNA exocytosis by large dense-core vesicle fusion
NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors
StatXFinder: a web-based self-directed tool that provides appropriate statistical test selection for biomedical researchers in their scientific studies
SPRINGERPLUS
, cilt.4, 2015 (SCI-Expanded)





PlumX Metrics

- Citations
- Citation Indexes: 2
- Captures
- Readers: 20
- Social Media
- Shares, Likes & Comments: 1744
Genome-Wide Gene Expression Analysis of NIH 3T3 Cell Line Under Mechanical Stimulation
Diğer Dergilerde Yayınlanan Makaleler
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler
Investigation of the Effects of Mutations in the FYR Module of Kabuki Syndrome-Associated KMT2D Gene on Protein Interactions and Chromatin Organization
Özden Yılmaz G., Yılmazbilek İ., Ölmez Türker A., Ozkan Kucuk N. E., ÖZLÜ SICAKKAN N., KARAKÜLAH G., et al.
9th International Congress of the Molecular Biology Association of Turkey, İzmir, Türkiye, 12 - 14 Eylül 2024
Transcriptomic profiling of induced pluripotent stem cell derived eye field cells
15th International Symposium on Health Informatics and Bioinformatics, Mersin, Türkiye, 20 - 21 Ekim 2022
Metabolomics analysis of iPSCs derived organoids
15th International Symposium on Health Informatics and Bioinformatics, Mersin, Türkiye, 20 - 21 Ekim 2022
THE EFFECT OF HISTONE VARIANT H2A.Z-1 KNOCKDOWN IN EPITHELIAL TO MESENCHYMAL TRANSITION
8th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon’22), Türkiye, 9 - 12 Haziran 2022
Functional Analysis of Noncoding RNAs Critical to the Mesenchymal Epithelial Transformation Process
8th International Congress of the Molecular Biology Association of Turkey, İstanbul, Türkiye, 9 - 12 Haziran 2022
EPIGENETIC REGULATION OF EPITHELIAL TO MESENCHYMAL TRANSITION BY HISTONE VARIANT H3.3A
8th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon’22), İstanbul, Türkiye, 9 - 12 Haziran 2022
Küçük Hücreli Dışı Akciğer Kanserinde Genetik Olmayan Osimertinib Direnç Mekanizmalarının CRISPR Tarama Aracılı Araştırılması
XVII. Tıbbi Biyoloji ve Genetik Kongresi, İzmir, Türkiye, 28 - 31 Ekim 2021

Mezenkimal Epitelyal Dönüşüm Sürecinde Epigenetik Yeniden Programlamayı Etkileyen Transkripsiyon Faktörlerinin Belirlenmesi
Onkolojide İz Bırakanlar Zirvesi, Türkiye, 14 - 16 Kasım 2019, ss.23
Hepatoselüler Karsinomanın Gelişiminde FAM134B: Dost Mu?, Düşman Mı?
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Türkiye, 14 - 17 Kasım 2019
Mezenkimal Epitelyal Dönüşüm Sürecinin Epigenetik Altyapısını Düzenleyen Transkripsiyon Faktörlerinin Araştırılması
Hezarfen Uluslararası Fen Matematik ve Mühendislik Bilimleri Kongresi, İzmir, Türkiye, 8 - 10 Kasım 2019, ss.1007
Mezenkimal Epitelyal Dönüşüm Sürecini Düzenleyen Transkripsyon Faktörlerinin Epigenetik Yeniden Programlama Süreci Üzerindeki Etkilerinin Saptanması
12. Tıp Bilişimi Kongresi, Ankara, Türkiye, 15 - 16 Kasım 2019, ss.30-36
HEPATOSELLÜLER KARSİNOMDA TGF-Β YANITININ HÜCRESEL MEKANİZMALARININ ARAŞTIRILMASI
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Türkiye, 14 - 17 Kasım 2019
Robust Gene Co-Expression Network Analysis
5th International Researchers, Statisticians and Young Statisticians Congress, 18 - 20 Ekim 2019
Investigation of cellular mechanisms of TGF-beta resistance in hepatocellular carcinoma
3. Çukurova Hepatoselüler Karsinoma Kongresi, Adana, Türkiye, 21 - 23 Şubat 2019
Differential Network Analysis with Partial Least Square Regression
11th International Statistics Days Conference (11th ISDC2018), Muğla, Türkiye, 3 - 07 Ekim 2018
Identification and Annotation of Putative lncRNAs Involved in Mesenchymal-Epithelial Transition
MOLBİYOLKON 2018 - 6th Interational Congress of the Molecular Biology Association of Turkey, 6 - 08 Eylül 2018
Investigation of the Cellular Mechanisms of TGF--induced Senescence-Resistance in Hepatocellular Carcinoma
6th International Congress of the Molecular Biology Association of Turkey, 5 - 08 Eylül 2018
Differential network analysis on mouse brain parts using PLSR
4th International Researchers, Statisticians and Young Statisticians Congress (IRSYSC 2018), 28 - 30 Nisan 2018
Gene Co-Expression Network Analysis with Partial Least Square Regression
COSTAS 2017 (International Conference on Computational and Statistical Methods in Applied Sciences) Kongresi, Samsun, Türkiye, 9 - 11 Kasım 2017
Computer Based Extraction of Phenoptypic Features of Human Congenital Anomalies from the Digital Literature with Natural Language Processing Techniques
25th European Medical Informatics Conference (MIE), İstanbul, Türkiye, 31 Ağustos - 03 Eylül 2014, cilt.205, ss.570-574



A data-driven living review for pharmacogenomic decision support in cancer treatment
24th Medical Informatics in Europe Conference, MIE 2012, Pisa, İtalya, 26 - 29 Ağustos 2012, cilt.180, ss.688-692



