Yayınlar & Eserler

Yayın Ağı
Makaleler 31
Tümü (31)
SCI-E, SSCI, AHCI (27)
SCI-E, SSCI, AHCI, ESCI (30)
ESCI (1)
Scopus (31)
TRDizin (1)

1. Novel anti-VEGF scFv antibodies with superior in vitro and in vivo activities

ÇAKAN AKDOĞAN G., Erez O., Ozer C., Onal E., Mert O., Gullu S., et al.
Scientific Reports , cilt.15, sa.1, 2025 (SCI-Expanded) identifier identifier identifier

2. Deglycosylation of VEGF Produced in Pichia pastoris Reduces its in Vitro Binding and Angiogenic Effect

KALYONCU UZUNLAR S., Ozer-Cokgezme C., Arslan M., Kurden-Pekmezci A., Erez O., ÇAKAN AKDOĞAN G., et al.
Biotechnology Journal , cilt.20, sa.11, 2025 (SCI-Expanded, Scopus) identifier identifier identifier

3. A green route to albumin/albumin polyelectrolyte complex nanoparticles in water with high drug loading for drug delivery

Sozer-Demirdas S. C., Erez O., ÇAKAN AKDOĞAN G., Akdogan Y.
International Journal of Biological Macromolecules , cilt.322, 2025 (SCI-Expanded) identifier identifier

4. Escape from TGF-β-induced senescence promotes aggressive hallmarks in epithelial hepatocellular carcinoma cells

Kalyoncu M., Demirci D., Eris S., Dayanc B., Cakiroglu E., Basol M., et al.
MOLECULAR ONCOLOGY , cilt.19, sa.9, ss.2594-2618, 2025 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

5. Periodate-Mediated Cross-Linking for the Preparation of Catechol Conjugated Albumin Nanoparticles Used for in Vitro Drug Delivery

Argitekin E., Erez O., ÇAKAN AKDOĞAN G., Akdogan Y.
ACS APPLIED BIO MATERIALS , cilt.8, sa.3, ss.2182-2193, 2025 (ESCI) Sürdürülebilir Kalkınma identifier identifier identifier

6. Loss of carbohydrate sulfotransferase 6 function leads to macular corneal dystrophy phenotypes and skeletal defects in zebrafish

Çakan Akdoğan G.
FEBS JOURNAL , cilt.292, sa.2, ss.373-390, 2025 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

7. Synthesis and Structure of Novel Phenothiazine Derivatives, and Compound Prioritization via In Silico Target Search and Screening for Cytotoxic and Cholinesterase Modulatory Activities in Liver Cancer Cells and In Vivo in Zebrafish

KIŞLA M. M., Yaman M., Zengin-Karadayi F., Korkmaz B., Bayazeid O., Kumar A., et al.
ACS Omega , cilt.9, sa.28, ss.30594-30614, 2024 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

8. A novel 2-aminophenalenone-based fluorescent probe designed for monitoring H2O2 for in vitro and in vivo bioimaging

Saygili E., Ersoz-Gulseven E., Kıbrıs E., ÇAKAN AKDOĞAN G., Ucuncu M.
TALANTA , cilt.271, 2024 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

9. Roadmap to DILI research in Europe. A proposal from COST action ProEuroDILINet

Lucena M., Villanueva-Paz M., Alvarez-Alvarez I., Aithal G., Björnsson E., ÇAKAN AKDOĞAN G., et al.
Pharmacological Research , cilt.200, 2024 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

10. The developmental stage is a critical parameter for accurate assessment of the drug-induced liver injury (DILI) potentials of drugs with the zebrafish larval liver model

ÇAKAN AKDOĞAN G., Bilgi C.
Biotech Studies , cilt.33, sa.2, ss.91-97, 2024 (Scopus) identifier identifier

11. Aronia melanocarpa (Michaux) Elliot Fruit Juice Attenuates Acetaminophen-induced Hepatotoxicity on Larval Zebrafish Model

BİLGİ Ç., ÇAKAN AKDOĞAN G.
Tarim Bilimleri Dergisi , cilt.30, sa.3, ss.458-463, 2024 (SCI-Expanded) Creative Commons License identifier identifier identifier

12. A zebrafish model for studying the mechanisms of newborn hyperbilirubinemia and bilirubin-induced neurological damage

Guzelkaya M., Onal E., Gelinci E., Kumral A., Çakan Akdoğan G.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY , cilt.11, 2023 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

13. Dopamine-Conjugated Bovine Serum Albumin Nanoparticles Containing pH-Responsive Catechol-V(III) Coordination for In Vitro and In Vivo Drug Delivery

Argitekin E., Ersoz-Gulseven E., ÇAKAN AKDOĞAN G., Akdogan Y.
BIOMACROMOLECULES , cilt.24, sa.8, ss.3603-3618, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

14. Synthesis of albumin nanoparticles in a water-miscible ionic liquid system, and their applications for chlorambucil delivery to cancer cells

Akdogan Y., Sozer S. C., Akyol C., Basol M., Karakoyun C., Cakan-Akdogan G.
JOURNAL OF MOLECULAR LIQUIDS , cilt.367, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

15. Effect of non-repetitive linker on in vitro and in vivo properties of an anti-VEGF scFv

Arslan M., Karadag M., Onal E., Gelinci E., ÇAKAN AKDOĞAN G., Kalyoncu S.
SCIENTIFIC REPORTS , cilt.12, sa.1, 2022 (SCI-Expanded, Scopus) identifier identifier identifier

16. Evaluation of drug induced liver injury (DILI) and systemic toxicity potentials of some marketed drugs on zebrafish model

Karakoyun C., Akdogan G. C.
TOXICOLOGY LETTERS , cilt.368, 2022 (SCI-Expanded) identifier

17. An in vivo zebrafish model reveals circulating tumor cell targeting capacity of serum albumin nanoparticles

Cakan-Akdogan G., Ersoz E., Sozer S. C., Gelinci E.
JOURNAL OF DRUG DELIVERY SCIENCE AND TECHNOLOGY , cilt.75, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

18. Roles of matrix metalloproteinases in the cornea: A special focus on macular corneal dystrophy

Kaya S. G., Inanc-Surer S., ÇAKAN AKDOĞAN G., OKTAY G., Utine C. A., Kalyoncu S.
Medicine in Drug Discovery , cilt.11, 2021 (Scopus) identifier

19. Transcriptomics Profiling Identifies Cisplatin-Inducible Death Receptor 5 Antisense Long Non-coding RNA as a Modulator of Proliferation and Metastasis in HeLa Cells

Gurer D. C., Erdogan I., Ahmadov U., Basol M., Sweef O., Cakan-Akdogan G., et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY , cilt.9, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

20. TAp73β Can Promote Hepatocellular Carcinoma Dedifferentiation

Iscan E., Ekin U., Yildiz G., Oz O., Keles U., Suner Karakülah A., et al.
CANCERS , cilt.13, sa.4, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

21. A simple desolvation method for production of cationic albumin nanoparticles with improved drug loading and cell uptake

Sozer S. C., Egesoy T. O., Basol M., ÇAKAN AKDOĞAN G., Akdogan Y.
JOURNAL OF DRUG DELIVERY SCIENCE AND TECHNOLOGY , 2020 (SCI-Expanded) identifier identifier

22. lncRNA HOTAIR overexpression induced downregulation of c-Met signaling promotes hybrid epithelial/mesenchymal phenotype in hepatocellular carcinoma cells

Topel H., Bagirsakci E., Comez D., Bagci G., ÇAKAN AKDOĞAN G., Atabey N.
CELL COMMUNICATION AND SIGNALING , cilt.18, sa.1, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

23. Preparation of albumin nanoparticles in water-in-ionic liquid microemulsions

Demirkurt B., ÇAKAN AKDOĞAN G., Akdogan Y.
JOURNAL OF MOLECULAR LIQUIDS , cilt.295, 2019 (SCI-Expanded) identifier identifier

24. Thioredoxin interacting protein promotes invasion in hepatocellular carcinoma

Gunes A., Bagirsakci E., İŞCAN E., ÇAKAN AKDOĞAN G., aykutlu u., ŞENTÜRK Ş., et al.
Oncotarget , cilt.9, sa.96, 2018 (Scopus) Creative Commons License identifier identifier identifier

25. THADA Regulates the Organismal Balance between Energy Storage and Heat Production

Moraru A., ÇAKAN AKDOĞAN G., Strassburger K., Males M., Mueller S., Jabs M., et al.
DEVELOPMENTAL CELL , cilt.41, sa.1, ss.72-87, 2017 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

26. EPR studies of intermolecular interactions and competitive binding of drugs in a drug-BSA binding model

Akdogan Y., Emrullahoglu M., Tatlidil D., Ucuncu M., ÇAKAN AKDOĞAN G.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS , cilt.18, sa.32, ss.22531-22539, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

27. A guanidinium modified rhodamine-based fluorescent probe for in vitro/vivo imaging of gold ions

Karakus E., ÇAKAN AKDOĞAN G., Emrullahoglu M.
ANALYTICAL METHODS , cilt.7, sa.19, ss.8004-8008, 2015 (SCI-Expanded) identifier identifier

28. Tissue-Specific Coupling between Insulin/IGF and TORC1 Signaling via PRAS40 in Drosophila

Pallares-Cartes C., ÇAKAN AKDOĞAN G., Teleman A. A.
DEVELOPMENTAL CELL , cilt.22, sa.1, ss.172-182, 2012 (SCI-Expanded) identifier identifier identifier

29. Assessment of diagnostic enzyme-linked immunosorbent assay kit and serological markers in human brucellosis

Cakan G., Bezirci F. B., Kacka A., Cesur S., Aksaray S., Tezeren D., et al.
JAPANESE JOURNAL OF INFECTIOUS DISEASES , cilt.61, sa.5, ss.366-370, 2008 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

30. Dynamic Fgf signaling couples morphogenesis and migration in the zebrafish lateral line primordium

Lecaudey V., ÇAKAN AKDOĞAN G., Norton W. H. J., Gilmour D.
DEVELOPMENT , cilt.135, sa.16, ss.2695-2705, 2008 (SCI-Expanded) identifier identifier identifier

31. S-carboxymethylcysteine inhibits the attachment of Streptococcus pneumoniae to human pharyngeal epithelial cells

Cakan G., Turkoz M., Turan T., Ahmed K., Nagatake T.
MICROBIAL PATHOGENESIS , cilt.34, sa.6, ss.261-265, 2003 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier identifier
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 23

1. Genetic polymorphisms associated with idiosyncratic drug-induced liver injury: a systematic review and bioinformatic analysis

Matilla-Cabello G., Remesal-Doblado A., Cinar M. C., Bodoque-Garcia A., Yilmaz F. B. M., Fernandez R. D. l. S., et al.
European-Association-for-the-Study-of-the-Liver Congress, Amsterdam, Hollanda, 7 - 10 Mayıs 2025, cilt.82, (Özet Bildiri) identifier

2. Escape from TGF-β-induced Senescence Promotes Aggressive Cancer Hallmarks in Epithelial Hepatocellular Carcinoma Cells

Kalyoncu M., Demirci D., ERİŞ S., Uluata Dayanç B., ÇAKIROĞLU E., BAŞOL M., et al.
The 2024 Annual Congress of the European Association for Cancer Research (EACR 2024), Rotterdam, Hollanda, 10 - 13 Haziran 2024, cilt.18, ss.347-348, (Özet Bildiri) Sürdürülebilir Kalkınma

3. A zebrafish model of macular cornea dystrophy provides the first preclinical test model

Esra E. G., BAŞOL M., Gelinci E., KALYONCU UZUNLAR S., YILDIRIM C. A., ÇAKAN AKDOĞAN G.
ESGCT 30th Annual Congress, Brüksel, Belçika, 24 Ekim 2023, (Özet Bildiri)

4. Diclofenac Induced Liver Injury Assessment in Zebrafish Model

KARAKOYUN Ç., ÇAKAN AKDOĞAN G.
International Congress of Medical and Health Sciences Studies, Ankara, Türkiye, 13 - 14 Aralık 2022, ss.119, (Özet Bildiri)

5. Modeling of rare disease in zebrafish though genetic modifications

ÇAKAN AKDOĞAN G.
I. International Advances in Molecular Biology Congress, İstanbul, Türkiye, 19 Eylül 2022, (Özet Bildiri)

6. Evaluation of drug induced liver injury (DILI) and systemic toxicity potentials of some marketed drugs on zebrafish model

BİLGİ Ç., ÇAKAN AKDOĞAN G.
XVIth International Congress of Toxicology (ICT 2022) UNITING IN TOXICOLOGY, Hollanda, 18 - 21 Eylül 2022, (Özet Bildiri)

7. Determination of a molecular signature to predict organ-specific metastasis using HCC model

Korhan P., BAĞIRSAKÇI E., ÖZTEMUR ISLAKOĞLU Y., ÇAKAN AKDOĞAN G., ATABEY S. N.
EACR 2022 Congress - Innovative Cancer Science: Translating Biology to Medicine, Sevilla, İspanya, 20 - 23 Haziran 2022, (Özet Bildiri)

8. Determination of a molecular signature to predict organ specific metastasis using HCC model

ÇAKAN AKDOĞAN G., ATABEY S. N., Bağırsakçı E.
28TH CONGRESS OF THE EUROPEAN ASSOCIATION FOR CANCER, Sevilla, İspanya, 20 - 23 Haziran 2022, (Özet Bildiri)

9. Mimicking liver microenvironment employing three-dimensional in vitro and in vivo zebrafish models

BAĞIRSAKÇI E., Korhan P., ÖZTEMUR ISLAKOĞLU Y., ÇAKAN AKDOĞAN G., ATABEY S. N.
EACR congress 2022, Innovative Cancer Science: Translating Biology to Medicine, Sevilla, İspanya, 20 - 23 Haziran 2022, cilt.1, (Özet Bildiri)

10. Cisplatin-inducible DR5-AS lncRNA modulates proliferation, metastasis, and cisplatin sensitivity through CAPRIN1

GÜRER D. C., KAÇAR V. İ., ERDOĞAN VATANSEVER İ., Ahmadov U., başol m., sweef o., et al.
MolBiyoKon 2022, Türkiye, 09 Haziran 2022, (Özet Bildiri)

11. Cisplatin-inducible DR5-AS lncRNA modulates proliferation, metastasis, and cisplatin sensitivity through CAPRIN1

gurer d. c., Kaçar v. i., ERDOĞAN VATANSEVER İ., ahmadov u., basol m., sweef o., et al.
International Congress of the Molecular Biology Association of Turkey, İstanbul, Türkiye, 09 Haziran 2022, (Özet Bildiri)

12. Effects of inhibition of Wnt/beta‐catenin pathway on Amacrine and Muller cells in retinas of zebrafish embryos at different development stages

Alkan Yeşilyurt G., Çark Ö., Bostanci A., ÇAKAN AKDOĞAN G., AKYÜZ ÜNSAL A. İ., ERGİN K., et al.
European Association for Vision and Eye Research Festival, Nice, Fransa, 03 Ocak 2022, (Tam Metin Bildiri) identifier

13. Effects of inhibition of wnt/beta catenin pathway on amacrine and Muller cells in retinas of zebrafish embryos at different development stages

Alkan Yeşilyurt G., Çark Ö., Bostancı A., ÇAKAN AKDOĞAN G., AKYÜZ ÜNSAL A. İ., ERGİN K., et al.
EVER congress, İtalya, 02 Ekim 2021, cilt.100, (Tam Metin Bildiri)

14. TAP73ün Hepatoselüler Karsinomada Pro-tümörojenik Rolü

İŞCAN E., YILDIZ G., ÖZ Ö., EKİN U., KELEŞ U., KARAKÜLAH G., et al.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Türkiye, 14 - 17 Kasım 2019, (Özet Bildiri)

15. HEPATOSELÜLER KARSİNOMADA YENİ YAKLAŞIM: POTANSİYEL İLAÇ HEDEFİ OLARAK AXL RESEPTÖRÜ

Batur T., KELEŞ U., İŞCAN E., Öz Ö., ŞENTÜRK Ş., ÇAKAN AKDOĞAN G., et al.
Onkolojide İz Bırakanlar, Antalya, Türkiye, 14 - 17 Kasım 2019, (Özet Bildiri)

16. Hepatosellüler Karsinoma’da AXL’ın rolü

Batur T., KELEŞ U., ŞENTÜRK Ş., ÇAKAN AKDOĞAN G., mutlu Z., İŞCAN E., et al.
16.Tıbbi Biyolojie ve Genetik Kongresi, 27 - 30 Ekim 2019

17. TAp73’ün hepatoselüler karsinomada tümör teşvik edici rolü

İŞCAN E., YILDIZ G., Öz Ö., Ekin U., Khoury N., KELEŞ U., et al.
16. Ulusal Tıbbi Biyoloji ve Genetik Kongresi (Uluslararası Katılımlı), Muğla, Türkiye, 27 - 30 Ekim 2019, (Özet Bildiri)

18. TXNIP’xxin HCC gelişimi ve ilerleyişindeki rolü

Güneş A., İŞCAN E., Bağırsakçı E., ÇAKAN AKDOĞAN G., aykutlu u., ŞENTÜRK Ş., et al.
XV.Ulusal Tıbbi Biyoloji ve Genetik Kongresi, Türkiye, 26 - 29 Ekim 2017, (Özet Bildiri)

19. Thioredoxin interacting protein promotes aggressive phenotypes in hepatocellualr carcinoma

Güneş A., İşcan E., ÇAKAN AKDOĞAN G., Bağırsakçı E., NART D., YILMAZ BARBET F., et al.
FEBS Advanced Lecture Course on Oncometabolism, 18 - 24 Haziran 2017, (Özet Bildiri)

20. TXNIP overexpression promotes agressive phenotype in HCC cell lines

Güneş A., İŞCAN E., ÇAKAN AKDOĞAN G., Bağırsakçı E., ÖZHAN H. G., ERDAL BAĞRIYANIK Ş. E., et al.
EMBO Workshop Metabolic Disorders and liver cancer, 23 - 26 Nisan 2017, (Özet Bildiri)

21. Polarising migrating tissues during organogenesis

Gilmour D., Haas P., Cakan G., Lecaudey V., Colombelli J., Stelzer E.
Society for Developmental Biology 67th annual meeting, Philadelphia, Amerika Birleşik Devletleri, 25 - 30 Temmuz 2008, ss.487-488, (Özet Bildiri)

22. Polarising migrating tissues during organogenesis

Gilmour D., Haas P., ÇAKAN AKDOĞAN G., Lecaucley V., Colombelli J., Stelzer E.
67th Annual Meeting of the Society-for-Developmental-Biology, Pennsylvania, Amerika Birleşik Devletleri, 25 - 30 Temmuz 2008, cilt.319, ss.488, (Özet Bildiri) identifier

23. Pushing and pulling migrating tissues in vivo with GPCRs

Gilmour D., Haas P., ÇAKAN AKDOĞAN G., Lecaudey V., Valentin G., Colombelli J., et al.
Experimental Biology 2007 Annual Meeting, Washington, Kiribati, 28 Nisan - 02 Mayıs 2007, cilt.21, (Özet Bildiri) identifier
Kitaplar 1

1. Zebra balığı kanser modelleri ve kişiselleştirilmiş tıp uygulamaları

Ersöz Gülseven E., ÇAKAN AKDOĞAN G.
Zebra Balığının Model Organizma Olarak Kullanımı, Pervin Dinçer, Editör, Türkiye Klinikleri Tıp Bilimleri Dergisi, Ankara, ss.53-58, 2023
Metrikler

Yayın

56

Yayın (WoS)

34

Yayın (Scopus)

31

Atıf (WoS)

565

H-İndeks (WoS)

12

Atıf (Scopus)

631

H-İndeks (Scopus)

14

Atıf (Scholar)

888

H-İndeks (Scholar)

15

Atıf (Sobiad)

23

H-İndeks (Sobiad)

3

Toplam Atıf Sayısı

588

Proje

16

Tez Danışmanlığı

5

Açık Erişim

6
BM Sürdürülebilir Kalkınma Amaçları