Publications & Works

Publication Network
Published journal articles indexed by SCI, SSCI, and AHCI

Loss of carbohydrate sulfotransferase 6 function leads to macular corneal dystrophy phenotypes and skeletal defects in zebrafish

Çakan Akdoğan G.
THE FEBS JOURNAL , vol.291, no.23, pp.1-18, 2024 (SCI-Expanded) Creative Commons License identifier

Synthesis and Structure of Novel Phenothiazine Derivatives, and Compound Prioritization via In Silico Target Search and Screening for Cytotoxic and Cholinesterase Modulatory Activities in Liver Cancer Cells and In Vivo in Zebrafish

KIŞLA M. M., Yaman M., Zengin-Karadayi F., Korkmaz B., Bayazeid O., Kumar A., et al.
ACS Omega , vol.9, no.28, pp.30594-30614, 2024 (SCI-Expanded) identifier identifier

A novel 2-aminophenalenone-based fluorescent probe designed for monitoring H2O2 for in vitro and in vivo bioimaging

Saygili E., Ersoz-Gulseven E., Kıbrıs E., ÇAKAN AKDOĞAN G., Ucuncu M.
Talanta , vol.271, 2024 (SCI-Expanded) identifier identifier

Roadmap to DILI research in Europe. A proposal from COST action ProEuroDILINet

Lucena M., Villanueva-Paz M., Alvarez-Alvarez I., Aithal G., Björnsson E., ÇAKAN AKDOĞAN G., et al.
Pharmacological Research , vol.200, 2024 (SCI-Expanded) identifier identifier

Aronia melanocarpa (Michaux) Elliot Fruit Juice Attenuates Acetaminophen-induced Hepatotoxicity on Larval Zebrafish Model

BİLGİ Ç., ÇAKAN AKDOĞAN G.
Tarim Bilimleri Dergisi , vol.30, no.3, pp.458-463, 2024 (SCI-Expanded) Creative Commons License identifier

Dopamine-Conjugated Bovine Serum Albumin Nanoparticles Containing pH-Responsive Catechol-V(III) Coordination for In Vitro and In Vivo Drug Delivery

Argitekin E., Ersoz-Gulseven E., ÇAKAN AKDOĞAN G., Akdogan Y.
BIOMACROMOLECULES , vol.24, no.8, pp.3603-3618, 2023 (SCI-Expanded) identifier identifier identifier

A zebrafish model for studying the mechanisms of newborn hyperbilirubinemia and bilirubin-induced neurological damage

Guzelkaya M., Onal E., Gelinci E., Kumral A., Çakan Akdoğan G.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY , vol.11, 2023 (SCI-Expanded) identifier identifier identifier

Synthesis of albumin nanoparticles in a water-miscible ionic liquid system, and their applications for chlorambucil delivery to cancer cells

Akdogan Y., Sozer S. C., Akyol C., Basol M., Karakoyun C., Cakan-Akdogan G.
JOURNAL OF MOLECULAR LIQUIDS , vol.367, 2022 (SCI-Expanded) Sustainable Development identifier identifier

Effect of non-repetitive linker on in vitro and in vivo properties of an anti-VEGF scFv

Arslan M., Karadag M., Onal E., Gelinci E., ÇAKAN AKDOĞAN G., Kalyoncu S.
SCIENTIFIC REPORTS , vol.12, no.1, 2022 (SCI-Expanded) identifier identifier identifier

An in vivo zebrafish model reveals circulating tumor cell targeting capacity of serum albumin nanoparticles

Cakan-Akdogan G., Ersoz E., Sozer S. C., Gelinci E.
JOURNAL OF DRUG DELIVERY SCIENCE AND TECHNOLOGY , vol.75, 2022 (SCI-Expanded) Sustainable Development identifier identifier

Transcriptomics Profiling Identifies Cisplatin-Inducible Death Receptor 5 Antisense Long Non-coding RNA as a Modulator of Proliferation and Metastasis in HeLa Cells

Gurer D. C., Erdogan I., Ahmadov U., Basol M., Sweef O., Cakan-Akdogan G., et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY , vol.9, 2021 (SCI-Expanded) identifier identifier identifier

TAp73β Can Promote Hepatocellular Carcinoma Dedifferentiation

Iscan E., Ekin U., Yildiz G., Oz O., Keles U., Suner Karakülah A., et al.
CANCERS , no.4, 2021 (SCI-Expanded) Sustainable Development identifier identifier identifier

A simple desolvation method for production of cationic albumin nanoparticles with improved drug loading and cell uptake

Sozer S. C., Egesoy T. O., Basol M., ÇAKAN AKDOĞAN G., Akdogan Y.
JOURNAL OF DRUG DELIVERY SCIENCE AND TECHNOLOGY , 2020 (SCI-Expanded) identifier identifier

lncRNA HOTAIR overexpression induced downregulation of c-Met signaling promotes hybrid epithelial/mesenchymal phenotype in hepatocellular carcinoma cells

Topel H., Bagirsakci E., Comez D., Bagci G., ÇAKAN AKDOĞAN G., Atabey N.
CELL COMMUNICATION AND SIGNALING , no.1, 2020 (SCI-Expanded) Sustainable Development identifier identifier identifier

Preparation of albumin nanoparticles in water-in-ionic liquid microemulsions

Demirkurt B., ÇAKAN AKDOĞAN G., Akdogan Y.
JOURNAL OF MOLECULAR LIQUIDS , 2019 (SCI-Expanded) identifier identifier

THADA Regulates the Organismal Balance between Energy Storage and Heat Production

Moraru A., ÇAKAN AKDOĞAN G., Strassburger K., Males M., Mueller S., Jabs M., et al.
DEVELOPMENTAL CELL , vol.41, no.1, pp.72-87, 2017 (SCI-Expanded) Creative Commons License Sustainable Development identifier identifier identifier

EPR studies of intermolecular interactions and competitive binding of drugs in a drug-BSA binding model

Akdogan Y., Emrullahoglu M., Tatlidil D., Ucuncu M., ÇAKAN AKDOĞAN G.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS , no.32, pp.22531-22539, 2016 (SCI-Expanded) identifier identifier identifier

A guanidinium modified rhodamine-based fluorescent probe for <i>in vitro</i>/<i>vivo</i> imaging of gold ions

Karakus E., ÇAKAN AKDOĞAN G., Emrullahoglu M.
ANALYTICAL METHODS , no.19, pp.8004-8008, 2015 (SCI-Expanded) identifier identifier

Tissue-Specific Coupling between Insulin/IGF and TORC1 Signaling via PRAS40 in Drosophila

Pallares-Cartes C., ÇAKAN AKDOĞAN G., Teleman A. A.
DEVELOPMENTAL CELL , vol.22, no.1, pp.172-182, 2012 (SCI-Expanded) identifier identifier identifier

Assessment of diagnostic enzyme-linked immunosorbent assay kit and serological markers in human brucellosis

Cakan G., Bezirci F. B., Kacka A., Cesur S., Aksaray S., Tezeren D., et al.
JAPANESE JOURNAL OF INFECTIOUS DISEASES , vol.61, no.5, pp.366-370, 2008 (SCI-Expanded) Sustainable Development identifier identifier identifier

Dynamic Fgf signaling couples morphogenesis and migration in the zebrafish lateral line primordium

Lecaudey V., ÇAKAN AKDOĞAN G., Norton W. H. J., Gilmour D.
DEVELOPMENT , vol.135, no.16, pp.2695-2705, 2008 (SCI-Expanded) identifier identifier identifier
Articles Published in Other Journals

Periodate-Mediated Cross-Linking for the Preparation of Catechol Conjugated Albumin Nanoparticles Used for in Vitro Drug Delivery

Argitekin E., Erez O., ÇAKAN AKDOĞAN G., Akdogan Y.
ACS Applied Bio Materials , 2025 (ESCI) identifier identifier

Roles of matrix metalloproteinases in the cornea: A special focus on macular corneal dystrophy

Kaya S. G., Inanc-Surer S., ÇAKAN AKDOĞAN G., OKTAY G., Utine C. A., Kalyoncu S.
Medicine in Drug Discovery , vol.11, 2021 (Scopus) identifier

Thioredoxin interacting protein promotes invasion in hepatocellular carcinoma

Gunes A., Bagirsakci E., İŞCAN E., ÇAKAN AKDOĞAN G., aykutlu u., ŞENTÜRK Ş., et al.
Oncotarget , vol.9, no.96, 2018 (Scopus) Creative Commons License identifier
Papers Published in Refereed Scientific Meetings

Escape from TGF-β-induced Senescence Promotes Aggressive Cancer Hallmarks in Epithelial Hepatocellular Carcinoma Cells

Kalyoncu M., Demirci D., ERİŞ S., Uluata Dayanç B., ÇAKIROĞLU E., BAŞOL M., et al.
The 2024 Annual Congress of the European Association for Cancer Research (EACR 2024), Rotterdam, Netherlands, 10 - 13 June 2024, vol.18, pp.347-348 Sustainable Development

A zebrafish model of macular cornea dystrophy provides the first preclinical test model

Esra E. G., BAŞOL M., Gelinci E., KALYONCU UZUNLAR S., YILDIRIM C. A., ÇAKAN AKDOĞAN G.
ESGCT 30th Annual Congress, Brüksel, Belgium, 24 October 2023

Diclofenac Induced Liver Injury Assessment in Zebrafish Model

KARAKOYUN Ç., ÇAKAN AKDOĞAN G.
International Congress of Medical and Health Sciences Studies, Ankara, Turkey, 13 - 14 December 2022, pp.119

Modeling of rare disease in zebrafish though genetic modifications

ÇAKAN AKDOĞAN G.
I. International Advances in Molecular Biology Congress, İstanbul, Turkey, 19 September 2022

Evaluation of drug induced liver injury (DILI) and systemic toxicity potentials of some marketed drugs on zebrafish model

BİLGİ Ç., ÇAKAN AKDOĞAN G.
XVIth International Congress of Toxicology (ICT 2022) UNITING IN TOXICOLOGY, Netherlands, 18 - 21 September 2022

Mimicking liver microenvironment employing three-dimensional in vitro and in vivo zebrafish models

BAĞIRSAKÇI E., Korhan P., ÖZTEMUR ISLAKOĞLU Y., ÇAKAN AKDOĞAN G., ATABEY S. N.
EACR congress 2022, Innovative Cancer Science: Translating Biology to Medicine, Sevilla, Spain, 20 - 23 June 2022, vol.1

Determination of a molecular signature to predict organ specific metastasis using HCC model

ÇAKAN AKDOĞAN G., ATABEY S. N., Bağırsakçı E.
28TH CONGRESS OF THE EUROPEAN ASSOCIATION FOR CANCER, Sevilla, Spain, 20 - 23 June 2022

Determination of a molecular signature to predict organ-specific metastasis using HCC model

Korhan P., BAĞIRSAKÇI E., ÖZTEMUR ISLAKOĞLU Y., ÇAKAN AKDOĞAN G., ATABEY S. N.
EACR 2022 Congress - Innovative Cancer Science: Translating Biology to Medicine, Sevilla, Spain, 20 - 23 June 2022

Cisplatin-inducible DR5-AS lncRNA modulates proliferation, metastasis, and cisplatin sensitivity through CAPRIN1

GÜRER D. C., KAÇAR V. İ., ERDOĞAN VATANSEVER İ., Ahmadov U., başol m., sweef o., et al.
MolBiyoKon 2022, Turkey, 09 June 2022

Cisplatin-inducible DR5-AS lncRNA modulates proliferation, metastasis, and cisplatin sensitivity through CAPRIN1

gurer d. c., Kaçar v. i., ERDOĞAN VATANSEVER İ., ahmadov u., basol m., sweef o., et al.
International Congress of the Molecular Biology Association of Turkey, İstanbul, Turkey, 09 June 2022

Effects of inhibition of Wnt/beta‐catenin pathway on Amacrine and Muller cells in retinas of zebrafish embryos at different development stages

Alkan Yeşilyurt G., Çark Ö., Bostanci A., ÇAKAN AKDOĞAN G., AKYÜZ ÜNSAL A. İ., ERGİN K., et al.
European Association for Vision and Eye Research Festival, Nice, France, 03 January 2022 identifier

Effects of inhibition of wnt/beta catenin pathway on amacrine and Muller cells in retinas of zebrafish embryos at different development stages

Alkan Yeşilyurt G., Çark Ö., Bostancı A., ÇAKAN AKDOĞAN G., AKYÜZ ÜNSAL A. İ., ERGİN K., et al.
EVER congress, Italy, 02 October 2021, vol.100

HEPATOSELÜLER KARSİNOMADA YENİ YAKLAŞIM: POTANSİYEL İLAÇ HEDEFİ OLARAK AXL RESEPTÖRÜ

Batur T., KELEŞ U., İŞCAN E., Öz Ö., ŞENTÜRK Ş., ÇAKAN AKDOĞAN G., et al.
Onkolojide İz Bırakanlar, Antalya, Turkey, 14 - 17 November 2019

TAP73ün Hepatoselüler Karsinomada Pro-tümörojenik Rolü

İŞCAN E., YILDIZ G., ÖZ Ö., EKİN U., KELEŞ U., KARAKÜLAH G., et al.
ONKOLOJİDE İZ BIRAKANLAR ZİRVESİ, Antalya, Turkey, 14 - 17 November 2019

Hepatosellüler Karsinoma’da AXL’ın rolü

Batur T., KELEŞ U., ŞENTÜRK Ş., ÇAKAN AKDOĞAN G., mutlu Z., İŞCAN E., et al.
16.Tıbbi Biyolojie ve Genetik Kongresi, 27 - 30 October 2019

TAp73’ün hepatoselüler karsinomada tümör teşvik edici rolü

İŞCAN E., YILDIZ G., Öz Ö., Ekin U., Khoury N., KELEŞ U., et al.
16. Ulusal Tıbbi Biyoloji ve Genetik Kongresi (Uluslararası Katılımlı), Muğla, Turkey, 27 - 30 October 2019

TXNIP’xxin HCC gelişimi ve ilerleyişindeki rolü

Güneş A., İŞCAN E., Bağırsakçı E., ÇAKAN AKDOĞAN G., aykutlu u., ŞENTÜRK Ş., et al.
XV.Ulusal Tıbbi Biyoloji ve Genetik Kongresi, Turkey, 26 - 29 October 2017

Thioredoxin interacting protein promotes aggressive phenotypes in hepatocellualr carcinoma

Güneş A., İşcan E., ÇAKAN AKDOĞAN G., Bağırsakçı E., NART D., YILMAZ BARBET F., et al.
FEBS Advanced Lecture Course on Oncometabolism, 18 - 24 June 2017

TXNIP overexpression promotes agressive phenotype in HCC cell lines

Güneş A., İŞCAN E., ÇAKAN AKDOĞAN G., Bağırsakçı E., ÖZHAN H. G., ERDAL BAĞRIYANIK Ş. E., et al.
EMBO Workshop Metabolic Disorders and liver cancer, 23 - 26 April 2017

Polarising migrating tissues during organogenesis

Gilmour D., Haas P., Cakan G., Lecaudey V., Colombelli J., Stelzer E.
Society for Developmental Biology 67th annual meeting, Philadelphia, United States Of America, 25 - 30 July 2008, pp.487-488
Books

Zebra balığı kanser modelleri ve kişiselleştirilmiş tıp uygulamaları

Ersöz Gülseven E., ÇAKAN AKDOĞAN G.
in: Zebra Balığının Model Organizma Olarak Kullanımı, Pervin Dinçer, Editor, Türkiye Klinikleri Tıp Bilimleri Dergisi, Ankara, pp.53-58, 2023
Metrics

Publication

45

Citation (WoS)

469

H-Index (WoS)

11

Citation (Scopus)

521

H-Index (Scopus)

12

Citation (Scholar)

784

H-Index (Scholar)

14

Citation (Sobiad)

20

H-Index (Sobiad)

3

Project

9

Thesis Advisory

4

Open Access

7
UN Sustainable Development Goals