Investigation of Lynch-related variants in breast cancer cases: Is there an overlooked association?


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Özkan E., Kocabey M., Bora E., Ülgenalp A., Çağlayan A. O.

The European Human Genetics Conference 2025, Milan, İtalya, 24 - 27 Mayıs 2025, (Yayınlanmadı)

  • Yayın Türü: Bildiri / Yayınlanmadı
  • Basıldığı Şehir: Milan
  • Basıldığı Ülke: İtalya
  • Dokuz Eylül Üniversitesi Adresli: Evet

Özet

Investigation of Lynch-related variants in breast cancer cases: Is there an overlooked association?

Etkin Özkan, Mehmet Kocabey, Elçin Bora, Ayfer Ülgenalp, Ahmet Okay Çağlayan

 

Background: Lynch syndrome is one of the most prevalent hereditary cancer syndromes. Its prevalence is approximately 1 in 279. While many studies have suggested a modest increase in breast cancer risk, the relationship between breast cancer and Lynch syndrome remains controversial. This study aims to enhance our understanding of the potential association between Lynch syndrome and breast cancer through an analysis of our own data.

Material and Method: Next-generation sequencing panel data, including hereditary cancer predisposition genes, of 861 patients diagnosed with breast cancer between 2018 and 2024 were collected retrospectively. Variants classified as pathogenic (P), likely pathogenic (LP), and variant of uncertain significance (VUS) in Lynch syndrome-associated genes were re-analyzed.

Results: Among the 861 patients, 84 P/LP and VUS variants were identified in 81 individuals. In the MLH1 gene, 3 LP variants (0.35%) and 37 VUS (4.30%); in the MSH2, 1 LP variant (0.12%) and 14 VUS (1.63%); in the MSH6, 28 VUS (3.25%) and in PMS2 gene, 1 VUS (0.12%) were detected. Overall, LP variants were observed in 0.46%, VUS were observed in 9.23% of the patients. Patients with detected likely pathogenic variants did not have colorectal or endometrial cancer history.

Conclusion: When compared to the population prevalence of Lynch syndrome, the frequency of LP/P variants identified in the breast cancer cohort was found to be similar. In cases where breast cancer is the only symptom, Lynch syndrome should be considered only after the exclusion of primary breast cancer associated gene mutations.

 

Keywords: Lynch Syndrome, breast cancer, next generation sequencing