A short note on the paper of Liu et al. (2012). A relative Lempel-Ziv complexity: Application to comparing biological sequences. Chemical Physics Letters, volume 530, 19 March 2012, pages 107-112

Arit T., Keskin B., Firuzan E., Kandemir Çavaş Ç., Liu L., Çavaş L.

CHEMICAL PHYSICS LETTERS, cilt.698, ss.110-113, 2018 (SCI-Expanded) identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 698
  • Basım Tarihi: 2018
  • Doi Numarası: 10.1016/j.cplett.2018.02.068
  • Dergi Adı: CHEMICAL PHYSICS LETTERS
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus
  • Sayfa Sayıları: ss.110-113
  • Anahtar Kelimeler: Bioinformatics, Biosequence analysis, Caulerpa taxifolia, Lempel-Ziv algorithm, PHYLOGENETIC ANALYSIS, CAULERPA-TAXIFOLIA
  • Dokuz Eylül Üniversitesi Adresli: Evet

Özet

The report entitled "L. Liu, D. Li, F. Bai, A relative Lempel-Ziv complexity: Application to comparing biological sequences, Chem. Phys. Lett. 530 (2012) 107-112" mentions on the powerful construction of phylogenetic trees based on Lempel-Ziv algorithm. On the other hand, the method explained in the paper does not give promising result on the data set on invasive Caulerpa taxifolia in the Mediterranean Sea. The phylogenetic trees are obtained by the proposed method of the aforementioned paper in this short note. (C) 2018 Elsevier B.V. All rights reserved.