Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, vol.141, pp.104908, 2021 (SCI-Expanded)
Article / Article
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology
Science Citation Index Expanded (SCI-EXPANDED), Scopus, Academic Search Premier, CAB Abstracts, EMBASE, MEDLINE, Public Affairs Index, Veterinary Science Database
Viral metagenomics, Benchmark, Bioinformatic pipelines, ENCEPHALITIS, ALIGNMENT
Dokuz Eylül University Affiliated:
Introduction: Metagenomic sequencing is increasingly being used in clinical settings for difficult to diagnose cases. The performance of viral metagenomic protocols relies to a large extent on the bioinformatic analysis. In this study, the European Society for Clinical Virology (ESCV) Network on NGS (ENNGS) initiated a benchmark of metagenomic pipelines currently used in clinical virological laboratories.