Unraveling the Mystery: Next Generation Sequencing Sheds Light on Neuroblastoma Pathogenesis and Targeted Therapies


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Aktas T., Kizmazoglu D., Aktas S., Erol A., Serinan E., Gokbayrak O., ...More

FRONTIERS IN BIOSCIENCE-LANDMARK, vol.28, no.8, pp.171-180, 2023 (SCI-Expanded) identifier

  • Publication Type: Article / Article
  • Volume: 28 Issue: 8
  • Publication Date: 2023
  • Doi Number: 10.31083/j.fbl2808171
  • Journal Name: FRONTIERS IN BIOSCIENCE-LANDMARK
  • Journal Indexes: Science Citation Index Expanded (SCI-EXPANDED)
  • Page Numbers: pp.171-180
  • Dokuz Eylül University Affiliated: Yes

Abstract

Background: There is considerable interest in the molecular evaluation of solid tumors in pediatric cases. Although clinical trials are in

progress for targeted therapies against neuroblastoma (NB), novel therapeutic strategies are needed for high-risk cases that are resistant

to therapy. The aim of the present study was to document the specific gene mutations related to targeted therapy in relapsed or refractory

NB patients by using next generation sequencing (NGS). Methods: The study included 57 NB patients from amongst 1965 neuroblastic

cases in Turkey who experienced a recurrence after multi-model therapy. The cases were diagnosed, risk-stratified, and treated according

to the classification system from the International Neuroblastoma Risk Group. Single nucleotide variations in 60 genes were investigated

using the Pillar Onco/Reveal Multicancer v4 panel and Pillar RNA fusion panel on the Illumina Miniseq platform. Results: ERBB2

I655V was the most frequent mutation and was found in 39.65% of cases. Anaplastic Lymphoma Kinase (ALK) mutations (F1174L,

R1275Q, and rare mutations in the tyrosine kinase domain) were detected in 29.3% of cases. Fusion mutations in NTRK1, NTRK3,

ROS1, RET, FGFR3, ALK and BRAF were observed in 19.6% of cases. Conclusions: This study presents valuable mutation data for

relapsed and refractory NB patients. The high frequency of the ERBB2 I655V mutation may allow further exploration of this mutation

as a potential therapeutic target. Rare BRAF mutations may also provide opportunities for targeted therapy. The role of ABL1 mutations

in NB should also be explored further.